RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PROB1E7EW31 1015 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 NEBLO76041 1014 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 F11P03951 625 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 RAP1GAPP47736 663 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 CORO7P57737 925 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 MYL7Q01449 175 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 FCHO2Q0JRZ9 810 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 DPYDQ12882 1025 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 VEPH1Q14D04 833 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 SURF1Q15526 300 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 TXNDC8Q6A555 127 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 FAM171BQ6P995 826 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 TXNDC11Q6PKC3 985 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 TSSK4Q6SA08 328 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 DNASE1L2Q92874 299 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 SHDQ96IW2 340 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 FNBP1Q96RU3 617 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 SLC22A12Q96S37 553 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 ARPC5LQ9BPX5 153 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 SYT15Q9BQS2 421 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 DMAC2Q9NW81 257 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 GTSE1Q9NYZ3 720 aa10.3□□□□□ -0.76
NIF3L1-202ENST00000409020 PES1O00541 588 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 ZNF263O14978 683 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 TPD52L2O43399 206 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SNUPNO95149 360 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 VNN1O95497 513 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SP9P0CG40 484 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 WARSP23381 471 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 BDNFP23560 247 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 HOXC13P31276 330 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 RDXP35241 583 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 LHX1P48742 406 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 CDH8P55286 799 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 NLRP12P59046 1061 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 USP46P62068 366 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SMARCB1Q12824 385 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 TAF12Q16514 161 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 NFE2Q16621 373 aaPredicted RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 MDH1BQ5I0G3 518 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 C1orf220Q5T0J3 134 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 TRIM68Q6AZZ1 485 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SCN4BQ8IWT1 228 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 MAB21L3Q8N8X9 362 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 PARD3BQ8TEW8 1205 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 DEPDC1BQ8WUY9 529 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 IRF7Q92985 503 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SYAP1Q96A49 352 aaPredicted RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 PCED1BQ96HM7 432 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 GPR88Q9GZN0 384 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 TASP1Q9H6P5 420 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SMYD3Q9H7B4 428 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 SPATA6Q9NWH7 488 aaPredicted RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 OTOGLQ3ZCN5 2332 aa10.29□□□□□ -0.76
NIF3L1-202ENST00000409020 OTOL1A6NHN0 477 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 NOL4O94818 638 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 NR3C1P04150 777 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CCNE1P24864 410 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CDC25CP30307 473 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SNRPFP62306 86 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CYP27A1Q02318 531 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 MTAPQ13126 283 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 ORC1Q13415 861 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 TBC1D25Q3MII6 688 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 ARHGAP15Q53QZ3 475 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SCARA5Q6ZMJ2 495 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SPATA2LQ8IUW3 424 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 KIAA1524Q8TCG1 905 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 USP13Q92995 863 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CLDN23Q96B33 292 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CHFRQ96EP1 664 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 EEF2KMTQ96G04 330 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CYP2S1Q96SQ9 504 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CRACR2AQ9BSW2 395 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 SDCBP2Q9H190 292 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 ABCB6Q9NP58 842 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 C2orf42Q9NWW7 574 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 BLOC1S6Q9UL45 172 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 MIA3Q5JRA6 1907 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 A0A1W2PQ27 194 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 A0A1W2PQ64 194 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 A0A1W2PQD8 194 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 C2orf72A6NCS6 295 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CLDN5O00501 218 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 CHADO15335 359 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 ZNF202O95125 648 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 C4BPAP04003 597 aaKnown RBP10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 PCSK1P29120 753 aa10.28□□□□□ -0.76
NIF3L1-202ENST00000409020 GNL1P36915 607 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms