RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TIE1P35590 1138 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 ATXN3P54252 364 aaPredicted RBP22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 PSMC1P62191 440 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 MRPS21P82921 87 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 CCDC142Q17RM4 750 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 KIAA1211LQ6NV74 962 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 DENND5BQ6ZUT9 1274 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 STXBP4Q6ZWJ1 553 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 FILIP1Q7Z7B0 1213 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 RASSF3Q86WH2 238 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 TXNDC5Q8NBS9 432 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 SPATA18Q8TC71 538 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 ZNF507Q8TCN5 953 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 ANKRD36BP1Q96IX9 119 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 SYT15Q9BQS2 421 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 GDAP2Q9NXN4 497 aa22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 ZNF638Q14966 1978 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-202ENST00000406335 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 TMEM8BA6NDV4 472 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 SLC9A3R1O14745 358 aaPredicted RBP22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 EIF3DO15371 548 aaKnown RBP eCLIP22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 ATP2C2O75185 946 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 KLF8O95600 359 aaPredicted RBP22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 APODP05090 189 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 PDGFRBP09619 1106 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 SLFN14P0C7P3 912 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 BDNFP23560 247 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 OPRD1P41143 372 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 MAGEA11P43364 429 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 BYSLQ13895 437 aaKnown RBP22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 BECN1Q14457 450 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 MAPRE1Q15691 268 aaKnown RBP22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 TMEFF1Q8IYR6 380 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 CEP57L1Q8IYX8 460 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 ALLCQ8N6M5 410 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 KDF1Q8NAX2 398 aaPredicted RBP22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 WHAMMQ8TF30 809 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 MYLPFQ96A32 169 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 PNKPQ96T60 521 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 MMS19Q96T76 1030 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 MTMR12Q9C0I1 747 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 PDE11AQ9HCR9 933 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 SMPD4Q9NXE4 827 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 CDH9Q9ULB4 789 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 CHD8Q9HCK8 2581 aa22.48■■□□□ 1.19
RHBDD3-202ENST00000406335 TNNC2P02585 160 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 TCF3P15923 654 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 RDXP35241 583 aaKnown RBP22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 COL9A2Q14055 689 aaPredicted RBP22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 SOWAHAQ2M3V2 549 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 EOGTQ5NDL2 527 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 SCARA3Q6AZY7 606 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 VSTM1Q6UX27 236 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 HS2ST1Q7LGA3 356 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 NELFCDQ8IXH7 590 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 GPD1LQ8N335 351 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 PAGE5Q96GU1 130 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 HPDLQ96IR7 371 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 SPATA17Q96L03 361 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 PKMYT1Q99640 499 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 GDPD2Q9HCC8 539 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 SLC39A2Q9NP94 309 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 HPSEQ9Y251 543 aa22.47■■□□□ 1.19
RHBDD3-202ENST00000406335 PVALEFA0A1B0GWK0 134 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 GABRDO14764 452 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 SCAMP3O14828 347 aaKnown RBP22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 TGFB1I1O43294 461 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 KLRC4O43908 158 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 PFKLP17858 780 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 LMO2P25791 158 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 SLC6A11P48066 632 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 IFRD2Q12894 506 aaPredicted RBP22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 FAM171BQ6P995 826 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 TMEM92Q6UXU6 159 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 DPH6Q7L8W6 267 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 ADGRG2Q8IZP9 1017 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 HDDC3Q8N4P3 179 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 SCFD1Q8WVM8 642 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 HMGB4Q8WW32 186 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 CPQQ9Y646 472 aa22.46■■□□□ 1.19
RHBDD3-202ENST00000406335 ANTXRLA6NF34 631 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 TRIM66O15016 1216 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 CLIC2O15247 247 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 CFIP05156 583 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 PPP3CCP48454 512 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 DHCR24Q15392 516 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 TDRD10Q5VZ19 366 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 CBWD2Q8IUF1 395 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 SYT12Q8IV01 421 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 GTPBP2Q9BX10 602 aaKnown RBP22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 SNX25Q9H3E2 840 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 ARHGEF4Q9NR80 690 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 HSPBP1Q9NZL4 362 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 EVLQ9UI08 416 aaPredicted RBP22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 ATP6V1DQ9Y5K8 247 aa22.45■■□□□ 1.18
RHBDD3-202ENST00000406335 CFAP47Q6ZTR5 3102 aa22.44■■□□□ 1.18
RHBDD3-202ENST00000406335 TNFRSF10BO14763 440 aa22.44■■□□□ 1.18
RHBDD3-202ENST00000406335 ZBTB24O43167 697 aaPredicted RBP22.44■■□□□ 1.18
RHBDD3-202ENST00000406335 UBE4BO95155 1302 aa22.44■■□□□ 1.18
RHBDD3-202ENST00000406335 KAT7O95251 611 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms