RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 HSPH1Q92598 858 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 APBB2Q92870 758 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 CAMKK2Q96RR4 588 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 CALN1Q9BXU9 219 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 FZD8Q9H461 694 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 PAK5Q9P286 719 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 DCTN4Q9UJW0 460 aa11.21□□□□□ -0.61
CLIP4-204ENST00000404424 TCRBV9S1A1TA0A576 114 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 GOLGA8RI6L899 631 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 HMGCRP04035 888 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 GM2AP17900 193 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 RXRBP28702 533 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 CDK16Q00536 496 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 NOL9Q5SY16 702 aaKnown RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 KLRG1Q96E93 195 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 NSL1Q96IY1 281 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 TRIM6Q9C030 488 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 MIS12Q9H081 205 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 RPF1Q9H9Y2 349 aaKnown RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 CYP3A43Q9HB55 503 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 HEY2Q9UBP5 337 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 AFG3L2Q9Y4W6 797 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 A0A0G2JND7 137 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 CFAP69A5D8W1 941 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 KBTBD13C9JR72 458 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 KRT19P08727 400 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 ATICP31939 592 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 GMPSP49915 693 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 ZNF143P52747 638 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 OVGP1Q12889 678 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 BLMHQ13867 455 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 KBTBD12Q3ZCT8 623 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 FAM91A1Q658Y4 838 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 C4orf50Q6ZRC1 276 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 PLPPR4Q7Z2D5 763 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 SLC26A11Q86WA9 606 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 APOBEC3FQ8IUX4 373 aaKnown RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 TRIM42Q8IWZ5 723 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 PTPRN2Q92932 1015 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 PTCD3Q96EY7 689 aaKnown RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 TMEM176AQ96HP8 235 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 KLF6Q99612 283 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 ADPGKQ9BRR6 497 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 DENND2DQ9H6A0 471 aaPredicted RBP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 ZNF180Q9UJW8 692 aa11.2□□□□□ -0.62
CLIP4-204ENST00000404424 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLIP4-204ENST00000404424 TRDMT1O14717 391 aaKnown RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 CILPO75339 1184 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 LGR5O75473 907 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 MICAL2O94851 1124 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 VDRP11473 427 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 NEFHP12036 1026 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 P4HA1P13674 534 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 GPD2P43304 727 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 RAP1GAPP47736 663 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 CDH6P55285 790 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 YWHAGP61981 247 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 FAAP100Q0VG06 881 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 LGSNQ5TDP6 509 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 LRRC6Q86X45 466 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 RIOX2Q8IUF8 465 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 IGDCC3Q8IVU1 814 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 MAP7D3Q8IWC1 876 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 KIRREL3Q8IZU9 778 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 SKA1Q96BD8 255 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 FAF2Q96CS3 445 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 SERAC1Q96JX3 654 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 FAM111AQ96PZ2 611 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 CNPY3Q9BT09 278 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 FAM124BQ9H5Z6 455 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 KCNK13Q9HB14 408 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 CNTN3Q9P232 1028 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 SIX4Q9UIU6 781 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 TNFSF13BQ9Y275 285 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 PIAS1O75925 651 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 SMNDC1O75940 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 DLDP09622 509 aaKnown RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 GPD1P21695 349 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 GCKP35557 465 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 CDH8P55286 799 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 PDK2Q15119 407 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 TAF5Q15542 800 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 FAM102AQ5T9C2 384 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 TAB3Q8N5C8 712 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-204ENST00000404424 C1orf127Q8N9H9 656 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 RTP4Q96DX8 246 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 MIPEPQ99797 713 aa11.19□□□□□ -0.62
CLIP4-204ENST00000404424 TMEM120AQ9BXJ8 343 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms