RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 PSMD5Q16401 504 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 USP45Q70EL2 814 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MTSS1LQ765P7 747 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MYO1HQ8N1T3 1032 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 TMA16Q96EY4 203 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 MAGEB10Q96LZ2 347 aaPredicted RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 ABCG4Q9H172 646 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 RIOX1Q9H6W3 641 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 A1CFQ9NQ94 594 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 CYP39A1Q9NYL5 469 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 FZD1Q9UP38 647 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ACKR2O00590 384 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 CLTBP09497 229 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 CCL5P13501 91 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 GLUD2P49448 558 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ETF1P62495 437 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 CNTN2Q02246 1040 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 TMCO4Q5TGY1 634 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 GPT2Q8TD30 523 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 SOAT2O75908 522 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ACSL3O95573 720 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 EPB42P16452 691 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 HTR1BP28222 390 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 CDH8P55286 799 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 KCNA10Q16322 511 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 VPS37AQ8NEZ2 397 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 DNAJC1Q96KC8 554 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 CAPS2Q9BXY5 557 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 CLPBQ9H078 707 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 GOLPH3Q9H4A6 298 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 GJB4Q9NTQ9 266 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 SMARCAL1Q9NZC9 954 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 TRAF3IP3Q9Y228 551 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 DUSP11O75319 330 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 SRP72O76094 671 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 CHKAP35790 457 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ATP5C1P36542 298 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 GNGT1P63211 74 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 HECTD3Q5T447 861 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 HLA-DQA1Q5Y7H0 255 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ALS2CLQ60I27 953 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 FAM47EQ6ZV65 393 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ZBED8Q8IZ13 594 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 STX19Q8N4C7 294 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 PDCD7Q8N8D1 485 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 TNIP2Q8NFZ5 429 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 RMDN2Q96LZ7 410 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ABCC13Q9NSE7 274 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MRGBPQ9NV56 204 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 XPO7Q9UIA9 1087 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 TTC7AQ9ULT0 858 aaPredicted RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 DRG1Q9Y295 367 aaKnown RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 DNTTP04053 509 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MMP3P08254 477 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MAPK1P28482 360 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MLH1P40692 756 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 SESN2P58004 480 aaPredicted RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 SETMARQ53H47 684 aaPredicted RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 ZPBP2Q6X784 338 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 SLC30A5Q8TAD4 765 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 ARNTL2Q8WYA1 636 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 TTC17Q96AE7 1141 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 NR1H4Q96RI1 486 aaPredicted RBP8.25□□□□□ -1.09
USP47-203ENST00000399455 EPC1Q9H2F5 836 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 TXLNGQ9NUQ3 528 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 VPS26AO75436 327 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 CXCL8P10145 99 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 HPGDP15428 266 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 SOAT1P35610 550 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 CYP24A1Q07973 514 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 IZUMO3Q5VZ72 239 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 MIPOL1Q8TD10 442 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 WDR41Q9HAD4 459 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 NDOR1Q9UHB4 597 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 TEX33O43247 280 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 SLC37A4O43826 429 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 TSPAN3O60637 253 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 PFKMP08237 780 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 TNNI3P19429 210 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 ZNF135P52742 658 aaPredicted RBP8.24□□□□□ -1.09
USP47-203ENST00000399455 CDR2LQ86X02 465 aaPredicted RBP8.24□□□□□ -1.09
USP47-203ENST00000399455 SYTL1Q8IYJ3 562 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 CCDC197Q8NCU1 140 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 BLOC1S5Q8TDH9 187 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 CCDC138Q96M89 665 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 PGLYRP2Q96PD5 576 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 FAM198AQ9UFP1 575 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 APPL1Q9UKG1 709 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 CICQ96RK0 1608 aaPredicted RBP8.24□□□□□ -1.09
USP47-203ENST00000399455 ATRNO75882 1429 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 SMIM35A0A1B0GVV1 85 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 SPAG6O75602 509 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 RAP1GAPP47736 663 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 TREML2Q5T2D2 321 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 STOX1Q6ZVD7 989 aa8.24□□□□□ -1.09
USP47-203ENST00000399455 EPM2AIP1Q7L775 607 aaPredicted RBP8.24□□□□□ -1.09
USP47-203ENST00000399455 HDDC3Q8N4P3 179 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms