RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
MBD1-208ENST00000398493 A0A1W2PPC1 479 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 TCRBV5S1A1TA0A578 114 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 SYF2O95926 243 aaKnown RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 GALTP07902 379 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 MTMR3Q13615 1198 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 ZNF268Q14587 947 aaPredicted RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 DDX42Q86XP3 938 aaKnown RBP eCLIP19.28■□□□□ 0.68
MBD1-208ENST00000398493 RCOR2Q8IZ40 523 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 CLP1Q92989 425 aaKnown RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 MCEEQ96PE7 176 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 FAM193BQ96PV7 902 aaPredicted RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 C17orf80Q9BSJ5 609 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 DPH5Q9H2P9 285 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 GBF1Q92538 1859 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 SIGLEC16A6NMB1 481 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 GOLGA8KD6RF30 607 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 NRP1O14786 923 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 DNAJB2P25686 324 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 OR1G1P47890 313 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 NDST1P52848 882 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 BCAR1P56945 870 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 RPL7AP62424 266 aaKnown RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 SPOUT1Q5T280 376 aaKnown RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 TSEN2Q8NCE0 465 aaKnown RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 C3orf58Q8NDZ4 430 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 BCL7CQ8WUZ0 217 aaPredicted RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 RSPH1Q8WYR4 309 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 RBM41Q96IZ5 413 aaKnown RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 TRIM51Q9BSJ1 452 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.28■□□□□ 0.68
MBD1-208ENST00000398493 FAN1Q9Y2M0 1017 aa19.28■□□□□ 0.68
MBD1-208ENST00000398493 PRG3Q9Y2Y8 225 aaPredicted RBP19.28■□□□□ 0.68
MBD1-208ENST00000398493 RALGAPA2Q2PPJ7 1873 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 SOX1O00570 391 aaPredicted RBP19.27■□□□□ 0.68
MBD1-208ENST00000398493 MICAL2O94851 1124 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 ITGB1P05556 798 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 KRT3P12035 628 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 CYP3A5P20815 502 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 PTGIRP43119 386 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 GSCP56915 257 aaPredicted RBP19.27■□□□□ 0.68
MBD1-208ENST00000398493 PSMC1P62191 440 aaKnown RBP19.27■□□□□ 0.68
MBD1-208ENST00000398493 SMAD3P84022 425 aaKnown RBP19.27■□□□□ 0.68
MBD1-208ENST00000398493 UPP1Q16831 310 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 ZFYVE27Q5T4F4 411 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 CD300LGQ6UXG3 332 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 NIPA2Q8N8Q9 360 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 GRK7Q8WTQ7 553 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 DDX56Q9NY93 547 aaKnown RBP19.27■□□□□ 0.68
MBD1-208ENST00000398493 MSRAQ9UJ68 235 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 PRDM4Q9UKN5 801 aa19.27■□□□□ 0.68
MBD1-208ENST00000398493 M0QYV0 167 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 AGPSO00116 658 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 RNF40O75150 1001 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 LRPAP1P30533 357 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 SIX1Q15475 284 aaPredicted RBP19.26■□□□□ 0.67
MBD1-208ENST00000398493 PTPN20Q4JDL3 420 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 PPP1R15BQ5SWA1 713 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 KCNT2Q6UVM3 1135 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 SYDE1Q6ZW31 735 aaPredicted RBP19.26■□□□□ 0.67
MBD1-208ENST00000398493 COLGALT1Q8NBJ5 622 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 IPO4Q8TEX9 1081 aaKnown RBP19.26■□□□□ 0.67
MBD1-208ENST00000398493 TWNKQ96RR1 684 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 FAM129AQ9BZQ8 928 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 TRIM31Q9BZY9 425 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 CERS4Q9HA82 394 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 MARCH5Q9NX47 278 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 ADAM21Q9UKJ8 722 aa19.26■□□□□ 0.67
MBD1-208ENST00000398493 TCRBV7S2A1N4TA0A589 114 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 GJB6O95452 261 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 ECEL1O95672 775 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 ALDH2P05091 517 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 ECHS1P30084 290 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 PNPLA4P41247 253 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 SNX16P57768 344 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 TAS2R40P59535 323 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 COPS2P61201 443 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 RAB30Q15771 203 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 CYP4A22Q5TCH4 519 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 C9orf57Q5W0N0 161 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 LCLAT1Q6UWP7 414 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 ZDHHC14Q8IZN3 488 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 IQCKQ8N0W5 287 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 FNIP1Q8TF40 1166 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 HASPINQ8TF76 798 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 PKNOX2Q96KN3 472 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 TMEM175Q9BSA9 504 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.25■□□□□ 0.67
MBD1-208ENST00000398493 SNX9Q9Y5X1 595 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 TDRD15B5MCY1 1934 aaKnown RBP19.25■□□□□ 0.67
MBD1-208ENST00000398493 GOLGA8SH3BPF8 625 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 O00370 1275 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 GABRB2P47870 512 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 ALDH7A1P49419 539 aaKnown RBP19.25■□□□□ 0.67
MBD1-208ENST00000398493 ORC1Q13415 861 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 HADHQ16836 314 aaKnown RBP19.25■□□□□ 0.67
MBD1-208ENST00000398493 TTC27Q6P3X3 843 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 UNC93AQ86WB7 457 aa19.25■□□□□ 0.67
MBD1-208ENST00000398493 SLCO2A1Q92959 643 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms