RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 GHRP10912 638 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 COPAP53621 1224 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 CCNJLQ8IV13 435 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 MRPL1Q9BYD6 325 aaKnown RBP12.9□□□□□ -0.34
SOCS6-201ENST00000397942 ILKAPQ9H0C8 392 aaPredicted RBP12.9□□□□□ -0.34
SOCS6-201ENST00000397942 KCNK1O00180 336 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 MGEA5O60502 916 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 CPB1P15086 417 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 YTHDF3Q7Z739 585 aaKnown RBP12.9□□□□□ -0.34
SOCS6-201ENST00000397942 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
SOCS6-201ENST00000397942 LRRC19Q9H756 370 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 TSPAN16Q9UKR8 245 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 VTNP04004 478 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
SOCS6-201ENST00000397942 PCSK7Q16549 785 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 LRRC8EQ6NSJ5 796 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 C10orf88Q9H8K7 445 aa12.9□□□□□ -0.34
SOCS6-201ENST00000397942 RRN3P2A6NIE6 340 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 E5RI56 91 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 RBAK-RBAKDNI3L0D1 243 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 BGNP21810 368 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 FECHP22830 423 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 CXorf38Q8TB03 319 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 NAF1Q96HR8 494 aaKnown RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ARHGEF38Q9NXL2 777 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 TJP2Q9UDY2 1190 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 R3HDM1Q15032 1099 aaKnown RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 RASA2Q15283 850 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 TATDN1Q6P1N9 297 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 EXOC3L1Q86VI1 746 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ARHGAP18Q8N392 663 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ASB7Q9H672 318 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 UBIAD1Q9Y5Z9 338 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 CBX6O95503 412 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 PTPN4P29074 926 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 NDST1P52848 882 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 TEX9Q8N6V9 391 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 PWWP2AQ96N64 755 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ARHGAP26Q9UNA1 814 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 NR2E1Q9Y466 385 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 DGKIO75912 1065 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 FLT3P36888 993 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 CNGA2Q16280 664 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 DENND1BQ6P3S1 775 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 KATNAL2Q8IYT4 538 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 TMEM51Q9NW97 253 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 PNPLA4P41247 253 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 LAYNQ6UX15 382 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 FRA10AC1Q70Z53 315 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 OR5B17Q8NGF7 314 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 NCLNQ969V3 563 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 TBCBQ99426 244 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 EGFL8Q99944 293 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
SOCS6-201ENST00000397942 SLCO1B3Q9NPD5 702 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 VAV3Q9UKW4 847 aa12.89□□□□□ -0.35
SOCS6-201ENST00000397942 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
SOCS6-201ENST00000397942 GLRA3O75311 464 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 GRIK1P39086 918 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 PTK6Q13882 451 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 DGKDQ16760 1214 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 SV2CQ496J9 727 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 ZNF484Q5JVG2 852 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 SCUBE3Q8IX30 993 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 CKAP2Q8WWK9 683 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
SOCS6-201ENST00000397942 AP1G2O75843 785 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 KCNA2P16389 499 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 FDFT1P37268 417 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 FOXD4Q12950 439 aaPredicted RBP12.88□□□□□ -0.35
SOCS6-201ENST00000397942 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 DENND5BQ6ZUT9 1274 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
SOCS6-201ENST00000397942 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 IL10P22301 178 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 BCAT1P54687 386 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
SOCS6-201ENST00000397942 CCL15Q16663 113 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 KBTBD12Q3ZCT8 623 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 LLGL2Q6P1M3 1020 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 PORCNQ9H237 461 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 LRRC40Q9H9A6 602 aa12.88□□□□□ -0.35
SOCS6-201ENST00000397942 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms