RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 RALGAPA1Q6GYQ0 2036 aa15.2■□□□□ 0.02
SNRNP25-203ENST00000397876 SPTBN2O15020 2390 aa15.2■□□□□ 0.02
SNRNP25-203ENST00000397876 SPAG17Q6Q759 2223 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 SLC9A3R1O14745 358 aaPredicted RBP15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 RTN3O95197 1032 aaPredicted RBP15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 OLFM2O95897 454 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 SLFN14P0C7P3 912 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 CASP4P49662 377 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 CACNA2D1P54289 1103 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 AASDHQ4L235 1098 aaPredicted RBP15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 DDX42Q86XP3 938 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 PDZD8Q8NEN9 1154 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 B3GNT5Q9BYG0 378 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 ARRDC1-AS1Q9H2J1 176 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 SMYD3Q9H7B4 428 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 VRTNQ9H8Y1 702 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 SMPD4Q9NXE4 827 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 KIAA1549LQ6ZVL6 1849 aa15.19■□□□□ 0.02
SNRNP25-203ENST00000397876 ATG2BQ96BY7 2078 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 CLDN5O00501 218 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 GDF9O60383 454 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 OAS1P00973 400 aaKnown RBP15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 CYP17A1P05093 508 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 MBL2P11226 248 aaPredicted RBP15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 YWHAQP27348 245 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 OPRD1P41143 372 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 RAP1GAPP47736 663 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 ZXDBP98169 803 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 DNM1Q05193 864 aaKnown RBP15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 NCOA4Q13772 614 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 ELF2Q15723 593 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 SCARA5Q6ZMJ2 495 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 FAM35AQ86V20 835 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 NUP93Q8N1F7 819 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 TSTD1Q8NFU3 115 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 PLEKHO2Q8TD55 490 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 PARD3BQ8TEW8 1205 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 OVCA2Q8WZ82 227 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 FBXO32Q969P5 355 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 ZC3H10Q96K80 434 aaKnown RBP15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 TNIP3Q96KP6 325 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 MED10Q9BTT4 135 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 RNF38Q9H0F5 515 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 TMEM30AQ9NV96 361 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 CFAP97Q9P2B7 532 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 PCDHGA5Q9Y5G8 931 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 MYO16Q9Y6X6 1858 aa15.18■□□□□ 0.02
SNRNP25-203ENST00000397876 ACTN4O43707 911 aaKnown RBP15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 KLRC4O43908 158 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 ZNF806P0C7X5 589 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 P4HA1P13674 534 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 SEC13P55735 322 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 STK4Q13043 487 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 PKP1Q13835 747 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 SF3A2Q15428 464 aaKnown RBP15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 PLK5Q496M5 336 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 PPM1JQ5JR12 505 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 IL31Q6EBC2 164 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 SLC9A9Q8IVB4 645 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 DDX1Q92499 740 aaKnown RBP15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 SMARCD1Q96GM5 515 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 DMAP1Q9NPF5 467 aaPredicted RBP15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 EBF1Q9UH73 591 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 RCOR1Q9UKL0 485 aa15.17■□□□□ 0.02
SNRNP25-203ENST00000397876 EML5Q05BV3 1969 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 RHOBTB1O94844 696 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 ADH1CP00326 375 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 C4BPAP04003 597 aaKnown RBP15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 MPLP40238 635 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 DGKEP52429 567 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 LIMK1P53667 647 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 CDH8P55286 799 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 CLDN10P78369 228 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 DHCR24Q15392 516 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 CCDC6Q16204 474 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 KMT5BQ4FZB7 885 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 C2orf27AQ580R0 203 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 VPS45Q9NRW7 570 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 DMAC2Q9NW81 257 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 TBC1D14Q9P2M4 693 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
SNRNP25-203ENST00000397876 K7EQS6 105 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 PDXKO00764 312 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 SCAMP3O14828 347 aaKnown RBP15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 AP1G2O75843 785 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 VNN1O95497 513 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 NR3C1P04150 777 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 MYL1P05976 194 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 ADRB1P08588 477 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 PFKFB1P16118 471 aa15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
SNRNP25-203ENST00000397876 KCNA4P22459 653 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms