RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 KCTD13Q8WZ19 329 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 SLC4A5Q9BY07 1137 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 ZDHHC7Q9NXF8 308 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 TAS2R14Q9NYV8 317 aa24.88■■□□□ 1.57
TSPAN4-203ENST00000397397 PIK3R2O00459 728 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 TNFRSF10BO14763 440 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 NCK2O43639 380 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 HNRNPA1P09651 372 aaKnown RBP eCLIP24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 GZMAP12544 262 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 LCP1P13796 627 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 HOXA9P31269 272 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 ACADSBP45954 432 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 SLC5A3P53794 718 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 IFRD2Q12894 506 aaPredicted RBP24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 MTMR3Q13615 1198 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 TAF12Q16514 161 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 SLC18A3Q16572 532 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 PTPN20Q4JDL3 420 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 CCDC170Q8IYT3 715 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 ELMOD1Q8N336 334 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 MSANTD4Q8NCY6 345 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 CPXM1Q96SM3 734 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 SYNCQ9H7C4 482 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 SPTLC3Q9NUV7 552 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 GREB1Q4ZG55 1949 aa24.87■■□□□ 1.57
TSPAN4-203ENST00000397397 CSH1P0DML2 217 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 CSH2P0DML3 217 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 CYLC1P35663 651 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 TKTL1P51854 596 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 ADIGQ0VDE8 80 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 RAB41Q5JT25 222 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 CCDC122Q5T0U0 273 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 PPP1R2P3Q6NXS1 205 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 EP400NLQ6ZTU2 488 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 ITIH5Q86UX2 942 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 C12orf76Q8N812 135 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 SCAMP5Q8TAC9 235 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 IPO4Q8TEX9 1081 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 ZNF512Q96ME7 567 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 SFXN1Q9H9B4 322 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 CYLDQ9NQC7 956 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 PRDM6Q9NQX0 595 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 CLDND1Q9NY35 253 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 NAGPAQ9UK23 515 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 MAGED2Q9UNF1 606 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 ASB3Q9Y575 518 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 CCDC195A0A1B0GUA6 201 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 E5RJQ4 531 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 NRDCO43847 1150 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 XYLBO75191 536 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 RTN2O75298 545 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 GABBR2O75899 941 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 RTN3O95197 1032 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 RPL34P49207 117 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 SNX16P57768 344 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 ANKRD54Q6NXT1 300 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 ALKBH5Q6P6C2 394 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 RAD9BQ6WBX8 426 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 DNAJB7Q7Z6W7 309 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 TMEM110Q86TL2 294 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 PHF13Q86YI8 300 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 SIX6OS1Q8N1H7 587 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 PSMG2Q969U7 264 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 PRKD2Q9BZL6 878 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 TJP2Q9UDY2 1190 aa24.86■■□□□ 1.57
TSPAN4-203ENST00000397397 FTLP02792 175 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 USP46P62068 366 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 MTF1Q14872 753 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 CTC1Q2NKJ3 1217 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 MMS22LQ6ZRQ5 1243 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 DNAAF5Q86Y56 855 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 C18orf8Q96DM3 657 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 C11orf70Q9BRQ4 267 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 COMMD8Q9NX08 183 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 EHD2Q9NZN4 543 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 ADAM22Q9P0K1 906 aa24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 EPN1Q9Y6I3 576 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-203ENST00000397397 PRUNE2Q8WUY3 3088 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 ERBB2P04626 1255 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 MMP8P22894 467 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 YWHAQP27348 245 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 C2CD6Q53TS8 623 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 RARS2Q5T160 578 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 CYP4A22Q5TCH4 519 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 TMC5Q6UXY8 1006 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 ULBP1Q9BZM6 244 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 MIS12Q9H081 205 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 ISCUQ9H1K1 167 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 FBXO44Q9H4M3 255 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 NENFQ9UMX5 172 aa24.84■■□□□ 1.57
TSPAN4-203ENST00000397397 ZNF638Q14966 1978 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 MYO16Q9Y6X6 1858 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 NDUFA10O95299 355 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 POU2F2P09086 479 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 USP17L7P0C7H9 530 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 HMGA1P17096 107 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 CCZ1BP86790 482 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 CCZ1P86791 482 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 MON1BQ7L1V2 547 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.83■■□□□ 1.571e-6■■■■□ 22.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms