RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TMEM63AO94886 807 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 UPP2O95045 317 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 OTUD4Q01804 1114 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 SLC25A11Q02978 314 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 UCMAQ8WVF2 138 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 SLC44A1Q8WWI5 657 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 HAUS1Q96CS2 278 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 OPTNQ96CV9 577 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 GPRASP2Q96D09 838 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 CYTH2Q99418 400 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 PAPOLBQ9NRJ5 636 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 DDX43Q9NXZ2 648 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 DLGAP2Q9P1A6 1054 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 AGTPBP1Q9UPW5 1226 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 CAPN14A8MX76 684 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 LPXNO60711 386 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 SMIM24O75264 130 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 EIF4BP23588 611 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 ACOT2P49753 483 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 CDK18Q07002 472 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 ZRSR2Q15696 482 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 GSTA3Q16772 222 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 ZFYVE27Q5T4F4 411 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 SLFN12LQ6IEE8 588 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 GADL1Q6ZQY3 521 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 RIOX2Q8IUF8 465 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 TMEM35BQ8NCS4 154 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 OXNAD1Q96HP4 312 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 POLR3FQ9H1D9 316 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 ASCC2Q9H1I8 757 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 C12orf65Q9H3J6 166 aaKnown RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 CYP26B1Q9NR63 512 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 FBXO6Q9NRD1 293 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 RBAKQ9NYW8 714 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-207ENST00000396581 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 WDR35Q9P2L0 1181 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
TRIM40-207ENST00000396581 LOC285556D6RIA3 1793 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 TCRBV7S3A2A0A539 114 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 SNUPNO95149 360 aaKnown RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 MT-ND3P03897 115 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 MYCLP12524 364 aaPredicted RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 CCND2P30279 289 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 RFC5P40937 340 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 GCLCP48506 637 aaPredicted RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 SARNPP82979 210 aaKnown RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 CCDC62Q6P9F0 684 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 DCUN1D2Q6PH85 259 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 PALM2Q8IXS6 379 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 PDIK1LQ8N165 341 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 VPS52Q8N1B4 723 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 ARHGAP24Q8N264 748 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 ARFGAP1Q8N6T3 406 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 FNIP1Q8TF40 1166 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 MCUR1Q96AQ8 359 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 ZBTB10Q96DT7 871 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 FBXO40Q9UH90 709 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 SCOCQ9UIL1 159 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 PPME1Q9Y570 386 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 A0A0B4J269 797 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 MAGEA13PA6NCF6 341 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 GOLGA8RI6L899 631 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 FCHO1O14526 889 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 SPAG6O75602 509 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 STAM2O75886 525 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 C1QAP02745 245 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 ESRRAP11474 423 aaPredicted RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 GNAT1P11488 350 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 KCNA2P16389 499 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 RCN2Q14257 317 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 KLF6Q99612 283 aaPredicted RBP13.91□□□□□ -0.18
TRIM40-207ENST00000396581 SPATC1LQ9H0A9 340 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 KCNK4Q9NYG8 393 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 DNAJB4Q9UDY4 337 aa13.91□□□□□ -0.18
TRIM40-207ENST00000396581 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-207ENST00000396581 CST8O60676 142 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 SESN3P58005 492 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 PTK7Q13308 1070 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 NCOA4Q13772 614 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 RBBP5Q15291 538 aaKnown RBP13.9□□□□□ -0.18
TRIM40-207ENST00000396581 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-207ENST00000396581 AP1ARQ63HQ0 302 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 MAP1SQ66K74 1059 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-207ENST00000396581 TMPRSS6Q8IU80 811 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 PPFIBP2Q8ND30 876 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 DNERQ8NFT8 737 aa13.9□□□□□ -0.18
TRIM40-207ENST00000396581 OR5B17Q8NGF7 314 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms