RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RDXP35241 583 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 GNL1P36915 607 aaPredicted RBP18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 STAT6P42226 847 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 CASP5P51878 434 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 SEC13P55735 322 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 PSMC1P62191 440 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 FOXC1Q12948 553 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 RESTQ13127 1097 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 GAB4Q2WGN9 574 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 IL17RCQ8NAC3 791 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 CEP76Q8TAP6 659 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 NOC3LQ8WTT2 800 aaKnown RBP18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 SNX25Q9H3E2 840 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 PCIF1Q9H4Z3 704 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 TCHHQ07283 1943 aa18.66■□□□□ 0.58
EXOSC3-202ENST00000396521 GIPC1O14908 333 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 PRPF6O94906 941 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 RTN3O95197 1032 aaPredicted RBP18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 OAS1P00973 400 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 PDGFRBP09619 1106 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 BCKDHBP21953 392 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 SNRPFP62306 86 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 ZXDBP98169 803 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 TRIM61Q5EBN2 209 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 SLC23A3Q6PIS1 610 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 RHBDF2Q6PJF5 856 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 ALLCQ8N6M5 410 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 TXNDC5Q8NBS9 432 aaKnown RBP18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 RNF38Q9H0F5 515 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 ARHGEF4Q9NR80 690 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 BCCIPQ9P287 314 aaKnown RBP eCLIP18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 ZMIZ1Q9ULJ6 1067 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 CPQQ9Y646 472 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 CLIC4Q9Y696 253 aa18.65■□□□□ 0.58
EXOSC3-202ENST00000396521 C1QTNF9BB2RNN3 333 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 F8VP50 259 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 ZBTB24O43167 697 aaPredicted RBP18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 KLF8O95600 359 aaPredicted RBP18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 C1QTNF9P0C862 333 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 ADH5P11766 374 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 USP46P62068 366 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 GAD2Q05329 585 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 TAF10Q12962 218 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 HNRNPDQ14103 355 aaKnown RBP18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 CCDC142Q17RM4 750 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 BTBD8Q5XKL5 378 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 TMEM92Q6UXU6 159 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 SLC36A4Q6YBV0 504 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 HS2ST1Q7LGA3 356 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 TRAPPC11Q7Z392 1133 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 TTC30AQ86WT1 665 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 OR5B17Q8NGF7 314 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 CFAP97Q9P2B7 532 aa18.64■□□□□ 0.57
EXOSC3-202ENST00000396521 IGF2RP11717 2491 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 EML5Q05BV3 1969 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 VPS37CA5D8V6 355 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 PATE3B3GLJ2 98 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 H0Y626 953 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 EIF3DO15371 548 aaKnown RBP eCLIP18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 AP5Z1O43299 807 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 HCRTO43612 131 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 TRIM16O95361 564 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 STAU1O95793 577 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 ABL1P00519 1130 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 PTPN1P18031 435 aaKnown RBP18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 YWHAQP27348 245 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 KIR2DL1P43626 348 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 TNNC1P63316 161 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 AMPD3Q01432 767 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 UAP1L1Q3KQV9 507 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 PEAR1Q5VY43 1037 aaPredicted RBP18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 LYSMD4Q5XG99 296 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 ABCA7Q8IZY2 2146 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 NUP93Q8N1F7 819 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 FNBP1Q96RU3 617 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 TNMDQ9H2S6 317 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 CUEDC2Q9H467 287 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 COMMD8Q9NX08 183 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 HSPBP1Q9NZL4 362 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 NEUROG3Q9Y4Z2 214 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 OBSL1O75147 1896 aa18.63■□□□□ 0.57
EXOSC3-202ENST00000396521 SGK1O00141 431 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 CD2BP2O95400 341 aaKnown RBP18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 MBL2P11226 248 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 ATICP31939 592 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 TIE1P35590 1138 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 TUBP50607 506 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 ATXN3P54252 364 aaPredicted RBP18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 DUOXA1Q1HG43 343 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 MAP7D1Q3KQU3 841 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 MDH1BQ5I0G3 518 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 SNX30Q5VWJ9 437 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 HDDC3Q8N4P3 179 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 OR6B3Q8NGW1 331 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 SCNM1Q9BWG6 230 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 SMPD4Q9NXE4 827 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 DEC1Q9P2X7 70 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 PILRBQ9UKJ0 227 aa18.62■□□□□ 0.57
EXOSC3-202ENST00000396521 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms