RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 C6orf203Q9P0P8 240 aaPredicted RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 KANSL3Q9P2N6 904 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 ITGA11Q9UKX5 1188 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 NRXN1Q9ULB1 1477 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 CYTH3O43739 400 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 AP1G2O75843 785 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 CYP2B6P20813 491 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF438Q7Z4V0 828 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 WDR49Q8IV35 697 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 HERC6Q8IVU3 1022 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 SUGP1Q8IWZ8 645 aaKnown RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 KCNV2Q8TDN2 545 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF669Q96BR6 464 aaPredicted RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MRPL48Q96GC5 212 aaKnown RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 ZIM3Q96PE6 472 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 THAP2Q9H0W7 228 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 EHD4Q9H223 541 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 HEATR9A2RTY3 570 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 RARGP13631 454 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 CYP11B1P15538 503 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 PTPN7P35236 360 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 SOAT1P35610 550 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 PRIM2P49643 509 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 KRR1Q13601 381 aaKnown RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 CYP4A22Q5TCH4 519 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 FAM83AQ86UY5 434 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 DTNBP1Q96EV8 351 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 ZFYVE19Q96K21 471 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 XPO6Q96QU8 1125 aaKnown RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MTMR12Q9C0I1 747 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 TRIM10Q9UDY6 481 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MARCOQ9UEW3 520 aaPredicted RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 CCT8L1PA6NM43 557 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 DAB1O75553 588 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 TGFB2P61812 414 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MRPS35P82673 323 aaKnown RBP5.65□□□□□ -1.51
VPS13C-204ENST00000395898 SLC22A9Q8IVM8 553 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 OSCP1Q8WVF1 389 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MAGEB18Q96M61 343 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 KCNF1Q9H3M0 494 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 PDGFCQ9NRA1 345 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 WWOXQ9NZC7 414 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 NCKIPSDQ9NZQ3 722 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 LNPEPQ9UIQ6 1025 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 TMX2Q9Y320 296 aa5.65□□□□□ -1.51
VPS13C-204ENST00000395898 MAPK1P28482 360 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PEX5P50542 639 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 TXNRD3Q86VQ6 643 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RIN3Q8TB24 985 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 VCPIP1Q96JH7 1222 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CELF4Q9BZC1 486 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ASCC2Q9H1I8 757 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CTDNEP1O95476 244 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 BFSP2Q13515 415 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 NLRP9Q7RTR0 991 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 TERB1Q8NA31 727 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 USP33Q8TEY7 942 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SH3GL3Q99963 347 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SYTL2Q9HCH5 934 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 TLR8Q9NR97 1041 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CPS1P31327 1500 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PRR23D1E9PI22 279 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 UBXN8O00124 270 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PRR23D2P0DMB1 279 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 THRAP10827 490 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 THPOP40225 353 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 NT5DC4Q86YG4 428 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 C4orf19Q8IY42 314 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ADGRF2Q8IZF7 708 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RUVBL2Q9Y230 463 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 STARD13Q9Y3M8 1113 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 MYH15Q9Y2K3 1946 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 DCDC2CA8MYV0 355 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 IGF2BP3O00425 579 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 HSD17B3P37058 310 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 OXCT1P55809 520 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 HUNKP57058 714 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 MCL1Q07820 350 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PKN2Q16513 984 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 LRRC36Q1X8D7 754 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF720Q7Z2F6 126 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SH2D3CQ8N5H7 860 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SLC25A41Q8N5S1 370 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RIN2Q8WYP3 895 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 FBXO32Q969P5 355 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CNDP1Q96KN2 507 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PRRG3Q9BZD7 231 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SPATA31A5Q5VU36 1347 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SPATA31A7Q8IWB4 1347 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 FOXN3O00409 490 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 LZTS3O60299 673 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PMPCBO75439 489 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SUPT7LO94864 414 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 BMP10O95393 424 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ALDH2P05091 517 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 VCAM1P19320 739 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 GUCA1AP43080 201 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 GMPSP49915 693 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SEL1L3Q68CR1 1132 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ITIH5Q86UX2 942 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms