RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ATP2C1P98194 919 aaPredicted RBP14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 TLE3Q04726 772 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 KDSRQ06136 332 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 RESTQ13127 1097 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 HLA-BQ31612 363 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 WDR45BQ5MNZ6 344 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 SYCP2LQ5T4T6 812 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 LRRC69Q6ZNQ3 347 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 RUFY3Q7L099 469 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 TMPRSS12Q86WS5 348 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 RGL4Q8IZJ4 473 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 THEM5Q8N1Q8 247 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 ZNF513Q8N8E2 541 aaPredicted RBP14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 SPIRE2Q8WWL2 714 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 NXPE2Q96DL1 559 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 RUSC1Q9BVN2 902 aa14.71□□□□□ -0.05
VCPKMT-201ENST00000395859 TEP1Q99973 2627 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 B8ZZF3 427 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 NFICP08651 508 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 HOXB2P14652 356 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 PSMA5P28066 241 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 NTSR1P30989 418 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 MATKP42679 507 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 RPL10AP62906 217 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 STK3Q13188 491 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 KCNB1Q14721 858 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 RTP5Q14D33 572 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 NFE2Q16621 373 aaPredicted RBP14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 JADE1Q6IE81 842 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 DHRS13Q6UX07 377 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 C1orf186Q6ZWK4 172 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 TRMT11Q7Z4G4 463 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 FAM181AQ8N9Y4 354 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 ERMNQ8TAM6 284 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 IPO4Q8TEX9 1081 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 GABRG3Q99928 467 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 RNF38Q9H0F5 515 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 TCHHQ07283 1943 aa14.7□□□□□ -0.06
VCPKMT-201ENST00000395859 DOPEY2Q9Y3R5 2298 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 BTBD18B2RXH4 712 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 CDC25AP30304 524 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 CFAP221Q4G0U5 840 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 RINT1Q6NUQ1 792 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 IL27RAQ6UWB1 636 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 METTL3Q86U44 580 aaKnown RBP14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 METTL23Q86XA0 190 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 ZCCHC9Q8N567 271 aaKnown RBP14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 MRGPRX1Q96LB2 322 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 ACOX2Q99424 681 aa14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 WSB2Q9NYS7 404 aaPredicted RBP14.69□□□□□ -0.06
VCPKMT-201ENST00000395859 RELNP78509 3460 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 SPTAN1Q13813 2472 aaKnown RBP14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 GOLGA8CPA6NN73 597 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 SFI1A8K8P3 1242 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 SLC9A3R1O14745 358 aaPredicted RBP14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 RRP8O43159 456 aaKnown RBP14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 CDKL5O76039 1030 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 ADH1CP00326 375 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 ADH5P11766 374 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 PDE6CP51160 858 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 STRN3Q13033 797 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 KYAT1Q16773 422 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 CCDC142Q17RM4 750 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 HAUS3Q68CZ6 603 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 FMNL3Q8IVF7 1028 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 CD302Q8IX05 232 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 FSIP1Q8NA03 581 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 CADM4Q8NFZ8 388 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 DRC1Q96MC2 740 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 PYM1Q9BRP8 204 aaKnown RBP14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 SLC6A17Q9H1V8 727 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 GMIPQ9P107 970 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 KIAA1024Q9UPX6 916 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 DERAQ9Y315 318 aa14.68□□□□□ -0.06
VCPKMT-201ENST00000395859 TMEM131Q92545 1883 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 LRRK2Q5S007 2527 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 HOXC11O43248 304 aaPredicted RBP14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 NDUFS2O75306 463 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 TULP3O75386 442 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 CD6P30203 668 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 TAF6P49848 677 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 TSPY1Q01534 308 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 SEMG2Q02383 582 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 PDIA5Q14554 519 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 PKDCCQ504Y2 493 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 LY6G5CQ5SRR4 150 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 EGFLAMQ63HQ2 1017 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 CENPQQ7L2Z9 268 aaPredicted RBP14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 TERB1Q8NA31 727 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 ACBD6Q9BR61 282 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 NRSN2Q9GZP1 204 aa14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 RPF1Q9H9Y2 349 aaKnown RBP14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 DDX19AQ9NUU7 478 aaKnown RBP14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 USP36Q9P275 1121 aaKnown RBP14.67□□□□□ -0.06
VCPKMT-201ENST00000395859 MYLKQ15746 1914 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 TBC1D3BA6NDS4 549 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms