RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 PGM2Q96G03 612 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 VRTNQ9H8Y1 702 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 INTS9Q9NV88 658 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 TPX2Q9ULW0 747 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 RARBP10826 455 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 FGFR1P11362 822 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 LMNB2Q03252 620 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 IFT88Q13099 833 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 KYAT1Q16773 422 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 MORN1Q5T089 497 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 HIBCHQ6NVY1 386 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 CCDC13Q8IYE1 715 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 NETO2Q8NC67 525 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 ARRDC4Q8NCT1 418 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 DYDC1Q8WWB3 177 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 PPM1EQ8WY54 764 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 A6NNZ2 444 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 AFF1P51825 1210 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 EIF3EP60228 445 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 BASP1P80723 227 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 INCA1Q0VD86 236 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 KRT81Q14533 505 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 OASLQ15646 514 aaKnown RBP18.74■□□□□ 0.59
SREBF1-204ENST00000395756 TUBB8Q3ZCM7 444 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 GNASQ5JWF2 1037 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 SPDYCQ5MJ68 293 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 ANKRD22Q5VYY1 191 aa18.74■□□□□ 0.59
SREBF1-204ENST00000395756 DNALI1O14645 258 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 GNL1P36915 607 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 ZNF143P52747 638 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 PDIA2Q13087 525 aaKnown RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 EMC10Q5UCC4 262 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 SRRM1Q8IYB3 904 aaKnown RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 RNF169Q8NCN4 708 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 GDAP1Q8TB36 358 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 FAM172AQ8WUF8 416 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 SMIM35A0A1B0GVV1 85 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 TRAPPC3O43617 180 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 RBP3P10745 1247 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 CTCFP49711 727 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 CCDC14Q49A88 953 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 FBXO47Q5MNV8 452 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 PLCD4Q9BRC7 762 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 TIMM13Q9Y5L4 95 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-204ENST00000395756 SCN1AP35498 2009 aa18.73■□□□□ 0.59
SREBF1-204ENST00000395756 C2CD4BA6NLJ0 364 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 KPNA7A9QM74 516 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 GABBR2O75899 941 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 FAM107AO95990 144 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 VIMP08670 466 aaKnown RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 HOXD8P13378 290 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 LIG3P49916 1009 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 COPS2P61201 443 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 TMED2Q15363 201 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 CA9Q16790 459 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 DARS2Q6PI48 645 aaKnown RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 MICALL1Q8N3F8 863 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 SLC2A14Q8TDB8 520 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 XPO6Q96QU8 1125 aaKnown RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 PLXNB2O15031 1838 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 TCRBV7S3A2A0A539 114 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 C17orf102A2RUQ5 167 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 CLDN5O00501 218 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 PAPSS1O43252 624 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 AGTP01019 485 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 CAV1Q03135 178 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 POLNQ7Z5Q5 900 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 ZIC5Q96T25 663 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 PAIP2Q9BPZ3 127 aaKnown RBP18.72■□□□□ 0.59
SREBF1-204ENST00000395756 PLXNA1Q9UIW2 1896 aa18.72■□□□□ 0.59
SREBF1-204ENST00000395756 H7C0C1 242 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 ATP5OP48047 213 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 BBOF1Q8ND07 529 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 CNPY3Q9BT09 278 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 NAALADL1Q9UQQ1 740 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 IPPQ9Y573 584 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 F5H423 210 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-204ENST00000395756 SDC4P31431 198 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 MMP13P45452 471 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 CPT1AP50416 773 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 FAXCQ5TGI0 409 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 SLC35B2Q8TB61 432 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 LPPQ93052 612 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 ARHGAP39Q9C0H5 1083 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 PLEKHA5Q9HAU0 1116 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 NR2E3Q9Y5X4 410 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 TMEM120BA0PK00 339 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 RPL22P35268 128 aaKnown RBP18.71■□□□□ 0.59
SREBF1-204ENST00000395756 GABRB2P47870 512 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 ZBTB6Q15916 424 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 ZCCHC9Q8N567 271 aaKnown RBP18.71■□□□□ 0.59
SREBF1-204ENST00000395756 FNIP1Q8TF40 1166 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 FAM149B1Q96BN6 582 aa18.71■□□□□ 0.59
SREBF1-204ENST00000395756 UBQLN1Q9UMX0 589 aaKnown RBP18.71■□□□□ 0.59
SREBF1-204ENST00000395756 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-204ENST00000395756 EXOC1LA0A1B0GW35 172 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms