RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 CLPXO76031 633 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CLTBP09497 229 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 POLR2MP0CAP2 368 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 NMT1P30419 496 aaKnown RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 ALDH1A3P47895 512 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TMBIM6P55061 237 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 NR5A1Q13285 461 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TDGQ13569 410 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 OCLNQ16625 522 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 FOXR2Q6PJQ5 311 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TOM1L2Q6ZVM7 507 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ENOSF1Q7L5Y1 443 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 RDH13Q8NBN7 331 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ANKRD49Q8WVL7 239 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 VPS33AQ96AX1 596 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 HPS4Q9NQG7 708 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 THAP1Q9NVV9 213 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 FETUBQ9UGM5 382 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 SERTAD1Q9UHV2 236 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 SRGNP10124 158 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CCND2P30279 289 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CIITAP33076 1130 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ARID5BQ14865 1188 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TTMPQ5BVD1 217 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 RASSF6Q6ZTQ3 369 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 PIK3AP1Q6ZUJ8 805 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ARL8AQ96BM9 186 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 GRIP1Q9Y3R0 1128 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 EEF2KO00418 725 aaKnown RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 TIMM44O43615 452 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ARHGEF15O94989 841 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 PTPREP23469 700 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CHKAP35790 457 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 NFYCQ13952 458 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 PDK4Q16654 411 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 FAM47AQ5JRC9 791 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TTC39BQ5VTQ0 682 aaPredicted RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 RBM15Q96T37 977 aaKnown RBP eCLIP6.73□□□□□ -1.331e-6■■□□□ 12.6
A1CF-206ENST00000395489 HERC2P3Q9BVR0 1158 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 KBTBD4Q9NVX7 518 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 GRID1Q9ULK0 1009 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 IQGAP1P46940 1657 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TSPAN4O14817 238 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 SERPINA6P08185 405 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 VWA5B1Q5TIE3 1220 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 GALNT7Q86SF2 657 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 VANGL1Q8TAA9 524 aaPredicted RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 TRUB1Q8WWH5 349 aaKnown RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 GON7Q9BXV9 100 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 AFG3L2Q9Y4W6 797 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 DNM1LO00429 736 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 H6PDO95479 791 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 GYPCP04921 128 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TPBGLP0DKB5 382 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CSTF2P33240 577 aaKnown RBP eCLIP6.73□□□□□ -1.332e-6■□□□□ 10.4
A1CF-206ENST00000395489 PTENP60484 403 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ZNF333Q96JL9 665 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 NEDD4LQ96PU5 975 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 GDAP2Q9NXN4 497 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 SHOC2Q9UQ13 582 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 LAMC3Q9Y6N6 1575 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TK2O00142 265 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TRAFD1O14545 582 aaPredicted RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 MMP1P03956 469 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 WARSP23381 471 aaKnown RBP6.73□□□□□ -1.33
A1CF-206ENST00000395489 CEBPGP53567 150 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 GPSM2P81274 684 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 UBE3CQ15386 1083 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 CORO6Q6QEF8 472 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 LRRC8DQ7L1W4 858 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 JAMLQ86YT9 394 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ZNF597Q96LX8 424 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 RETREG1Q9H6L5 497 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 C1orf112Q9NSG2 853 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 ANKRD6Q9Y2G4 727 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 N6AMT1Q9Y5N5 214 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 KCNE2Q9Y6J6 123 aa6.73□□□□□ -1.33
A1CF-206ENST00000395489 TTC26A0AVF1 554 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 RNF103O00237 685 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 TM7SF2O76062 418 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 GFPT1Q06210 699 aaPredicted RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 EGFLAMQ63HQ2 1017 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 GUF1Q8N442 669 aaKnown RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 MSANTD3Q96H12 275 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 ELMO2Q96JJ3 720 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 ZC3H10Q96K80 434 aaKnown RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 HTATIP2Q9BUP3 242 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 EXD2Q9NVH0 621 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 ZNF510Q9Y2H8 683 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 RAD54BQ9Y620 910 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 MAP2P11137 1827 aaKnown RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 SPDYE16A6NNV3 312 aaPredicted RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 SRP72O76094 671 aaKnown RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 PAMP19021 973 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 EPHB2P29323 1055 aa6.72□□□□□ -1.33
A1CF-206ENST00000395489 TSNQ15631 228 aaKnown RBP6.72□□□□□ -1.33
A1CF-206ENST00000395489 FAM83BQ5T0W9 1011 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms