RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 NME7Q9Y5B8 376 aa14.45□□□□□ -0.1
SCAF11-203ENST00000395453 CCDC163A0A0D9SF12 145 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 MYL1P05976 194 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 PDGFRBP09619 1106 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 PFKFB1P16118 471 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 ATICP31939 592 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 GNL1P36915 607 aaPredicted RBP14.44□□□□□ -0.1
SCAF11-203ENST00000395453 PSMC1P62191 440 aaKnown RBP14.44□□□□□ -0.1
SCAF11-203ENST00000395453 ITPRIPL2Q3MIP1 535 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 WDR72Q3MJ13 1102 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 KMT5BQ4FZB7 885 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 PLA2G2CQ5R387 149 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 RNF43Q68DV7 783 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 KBTBD6Q86V97 674 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 SCN4BQ8IWT1 228 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 TTC8Q8TAM2 541 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 RIN3Q8TB24 985 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 PARD3BQ8TEW8 1205 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 MRPL45Q9BRJ2 306 aaKnown RBP14.44□□□□□ -0.1
SCAF11-203ENST00000395453 KCTD10Q9H3F6 313 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 VRTNQ9H8Y1 702 aa14.44□□□□□ -0.1
SCAF11-203ENST00000395453 TMEM8BA6NDV4 472 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 OTOL1A6NHN0 477 aaPredicted RBP14.43□□□□□ -0.1
SCAF11-203ENST00000395453 PDXKO00764 312 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 EXOC3O60645 756 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 CCDC192P0DO97 292 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 BDNFP23560 247 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 CASP4P49662 377 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 AP3M2P53677 418 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 MYL6P60660 151 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 KRT85P78386 507 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 RUNX3Q13761 415 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 CCINQ13939 588 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 MYLPFQ96A32 169 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 PCED1BQ96HM7 432 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 SPATA32Q96LK8 384 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 SLC22A12Q96S37 553 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 CYP2S1Q96SQ9 504 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 HPS4Q9NQG7 708 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 VPS45Q9NRW7 570 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 EXOC1Q9NV70 894 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 GCNT4Q9P109 453 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 PKD1L2Q7Z442 2459 aa14.43□□□□□ -0.1
SCAF11-203ENST00000395453 AKAP3O75969 853 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 C4BPAP04003 597 aaKnown RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 HOXB1P14653 301 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 MPLP40238 635 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 NOVA1P51513 510 aaKnown RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 TRPC3Q13507 836 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 PON2Q15165 354 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 TDRD10Q5VZ19 366 aaKnown RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 FSIP1Q8NA03 581 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 SYAP1Q96A49 352 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 CHFRQ96EP1 664 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 ZC3H10Q96K80 434 aaKnown RBP14.42□□□□□ -0.1
SCAF11-203ENST00000395453 C8orf48Q96LL4 319 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 TTLL2Q9BWV7 592 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 SNX25Q9H3E2 840 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
SCAF11-203ENST00000395453 LRRIQ3A6PVS8 624 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TRIM66O15016 1216 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 USP17L7P0C7H9 530 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TCF3P15923 654 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 HOXC13P31276 330 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 GRIK1P39086 918 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 NDUFA8P51970 172 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 USP46P62068 366 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TNNC1P63316 161 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 NOP14P78316 857 aaKnown RBP14.41□□□□□ -0.1
SCAF11-203ENST00000395453 CYP27A1Q02318 531 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 FAM160A1Q05DH4 1040 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 ZNF77Q15935 545 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TMEM196Q5HYL7 178 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 MDH1BQ5I0G3 518 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TRIM68Q6AZZ1 485 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 DENND5BQ6ZUT9 1274 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 OR6B3Q8NGW1 331 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 SMOC1Q9H4F8 434 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 EBF3Q9H4W6 596 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TRAV19A0A0A6YYK7 116 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 C2orf78A6NCI8 922 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TRDMT1O14717 391 aaKnown RBP14.41□□□□□ -0.1
SCAF11-203ENST00000395453 ATG13O75143 517 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 PHACTR2O75167 634 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 RHOBTB3O94955 611 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 VNN1O95497 513 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 RPN1P04843 607 aaKnown RBP14.41□□□□□ -0.1
SCAF11-203ENST00000395453 PFKLP17858 780 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 SYKP43405 635 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 PXNP49023 591 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-203ENST00000395453 ZNF252P-AS1Q0IIN9 211 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 FOXC1Q12948 553 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 PDGFRLQ15198 375 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 DAB2IPQ5VWQ8 1189 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 ARL14EPQ8N8R7 260 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-203ENST00000395453 TMC2Q8TDI7 906 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 EDEM2Q9BV94 578 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 B3GNT5Q9BYG0 378 aa14.41□□□□□ -0.1
SCAF11-203ENST00000395453 ADAM33Q9BZ11 813 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms