RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 SPTLC1O15269 473 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 CCDC14Q49A88 953 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 LCLAT1Q6UWP7 414 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 GADL1Q6ZQY3 521 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 ARMC9Q7Z3E5 817 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 PPFIBP2Q8ND30 876 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 RNF217Q8TC41 542 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 SNX27Q96L92 541 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 PRMT1Q99873 361 aaKnown RBP10.76□□□□□ -0.69
HIF1A-203ENST00000394997 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 VCXQ9H320 206 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 SMARCAD1Q9H4L7 1026 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 C10orf88Q9H8K7 445 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 CNTN3Q9P232 1028 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 ACTL7BQ9Y614 415 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.76□□□□□ -0.69
HIF1A-203ENST00000394997 HMX2A2RU54 273 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 LUC7L3O95232 432 aaKnown RBP10.76□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF286BP0CG31 522 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 CSRP3P50461 194 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 EIF4EBP2Q13542 120 aaPredicted RBP10.76□□□□□ -0.69
HIF1A-203ENST00000394997 KYNUQ16719 465 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF484Q5JVG2 852 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 KIAA0319Q5VV43 1072 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 SLC9A4Q6AI14 798 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 STMN2Q93045 179 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 NT5C3BQ969T7 300 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 BICD1Q96G01 975 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 MAML3Q96JK9 1138 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 LPIN3Q9BQK8 851 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 ETNK1Q9HBU6 452 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 FETUBQ9UGM5 382 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 MCM8Q9UJA3 840 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 NEU3Q9UQ49 428 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 C2CD2Q9Y426 696 aa10.76□□□□□ -0.69
HIF1A-203ENST00000394997 ACSL3O95573 720 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 GSRP00390 522 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ADCYAP1R1P41586 468 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 DPYSL3Q14195 570 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 EFHC2Q5JST6 749 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 THEMIS2Q5TEJ8 643 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ATG14Q6ZNE5 492 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 USP37Q86T82 979 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 TMEM110Q86TL2 294 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 TRABD2AQ86V40 505 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 LRRC34Q8IZ02 419 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 GSTCDQ8NEC7 633 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 CKAP2Q8WWK9 683 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 PARP2Q9UGN5 583 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 CCT8L1PA6NM43 557 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 PIRO00625 290 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 IL18RAPO95256 599 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ATP6V1G2O95670 118 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ADORA2AP29274 412 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 MAPK6Q16659 721 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 C6orf118Q5T5N4 469 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 SLC30A9Q6PML9 568 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 UNC45BQ8IWX7 931 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ARRDC4Q8NCT1 418 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 DCAKDQ8WVC6 231 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 GBP5Q96PP8 586 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 FNBP1Q96RU3 617 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 SYT17Q9BSW7 474 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 CNOT10Q9H9A5 744 aaKnown RBP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 MRPL47Q9HD33 250 aaKnown RBP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 NAALADL1Q9UQQ1 740 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 hCG_2014768A0A024R1R8 64 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 IGF2BP3O00425 579 aaKnown RBP eCLIP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 PRPF4O43172 522 aaKnown RBP eCLIP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 CALB1P05937 261 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 DHRS4L1P0CG22 281 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF865P0CJ78 1059 aaPredicted RBP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 TRIP13Q15645 432 aaPredicted RBP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 PAQR9Q6ZVX9 377 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 ASB7Q9H672 318 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 SPON1Q9HCB6 807 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 VTA1Q9NP79 307 aa10.75□□□□□ -0.69
HIF1A-203ENST00000394997 CTDP1Q9Y5B0 961 aaPredicted RBP10.75□□□□□ -0.69
HIF1A-203ENST00000394997 OBSL1O75147 1896 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 VTNP04004 478 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 TXNP10599 105 aaKnown RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ATICP31939 592 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 GRM5P41594 1212 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 IREB2P48200 963 aaKnown RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 PTPN11Q06124 597 aaPredicted RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 SLC10A2Q12908 348 aaPredicted RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 XRCC4Q13426 336 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 PIGHQ14442 188 aaPredicted RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ZNF268Q14587 947 aaPredicted RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 WDR44Q5JSH3 913 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ARMC3Q5W041 872 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ARCQ7LC44 396 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 MCUR1Q96AQ8 359 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 MRPL45Q9BRJ2 306 aaKnown RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 MCMBPQ9BTE3 642 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 BEGAINQ9BUH8 593 aa10.74□□□□□ -0.69
HIF1A-203ENST00000394997 EIF2AQ9BY44 585 aaKnown RBP10.74□□□□□ -0.69
HIF1A-203ENST00000394997 ERAP1Q9NZ08 941 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms