RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 C12orf50Q8NA57 414 aaPredicted RBP13.21□□□□□ -0.29
SSH2-203ENST00000394848 C1orf54Q8WWF1 131 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 RXFP2Q8WXD0 754 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSH2-203ENST00000394848 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.29
SSH2-203ENST00000394848 HSFY1Q96LI6 401 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 SLITRK1Q96PX8 696 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 LBHD1Q9BQE6 289 aaPredicted RBP13.21□□□□□ -0.29
SSH2-203ENST00000394848 ERP44Q9BS26 406 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 HERPUD2Q9BSE4 406 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 CNPY3Q9BT09 278 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 B3GNT5Q9BYG0 378 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 CYLDQ9NQC7 956 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 KLHL11Q9NVR0 708 aa13.21□□□□□ -0.29
SSH2-203ENST00000394848 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 CLDN5O00501 218 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 ACRP10323 421 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 ODC1P11926 461 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 LCP1P13796 627 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 TKTP29401 623 aaKnown RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 PTGIRP43119 386 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 FNTAP49354 379 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 COPS2P61201 443 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 SLC25A11Q02978 314 aaKnown RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 TAF5Q15542 800 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 MDH1BQ5I0G3 518 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 ANKS1BQ7Z6G8 1248 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSH2-203ENST00000394848 JAMLQ86YT9 394 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 SEC14L1Q92503 715 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 RAPGEF5Q92565 580 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSH2-203ENST00000394848 TRIM51Q9BSJ1 452 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 MED10Q9BTT4 135 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 HOMER3Q9NSC5 361 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 RASAL2Q9UJF2 1139 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 CDH9Q9ULB4 789 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 I3L4J1 428 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 DAPK3O43293 454 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 EFCAB14O75071 495 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 IL1R2P27930 398 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 MIPP30301 263 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 PCK1P35558 622 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 FLT3P36888 993 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 KCNJ1P48048 391 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 KLF1Q13351 362 aaPredicted RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 HLTFQ14527 1009 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSH2-203ENST00000394848 KCTD19Q17RG1 926 aaPredicted RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
SSH2-203ENST00000394848 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 TRNP1Q6NT89 227 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 MFSD7Q6UXD7 560 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 SPOCD1Q6ZMY3 1216 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 PAQR9Q6ZVX9 377 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 CRIPAKQ8N1N5 446 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 PCSK1NQ9UHG2 260 aa13.2□□□□□ -0.3
SSH2-203ENST00000394848 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
SSH2-203ENST00000394848 MYBPHLA2RUH7 354 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 TJP3O95049 919 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 TRUB2O95900 331 aaKnown RBP13.19□□□□□ -0.3
SSH2-203ENST00000394848 FGBP02675 491 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 FAM153BP0C7A2 387 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 KRT10P13645 584 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 NPR3P17342 541 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 PCSK1P29120 753 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 BRCC3P46736 316 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 PLCB3Q01970 1234 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 NNTQ13423 1086 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 SNX1Q13596 522 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 FAM153CQ494X1 144 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 CCDC14Q49A88 953 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 TFDP3Q5H9I0 405 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 CLLU1OSQ5K130 101 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 KAZNQ674X7 775 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 DUPD1Q68J44 220 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 PSRC1Q6PGN9 363 aaPredicted RBP13.19□□□□□ -0.3
SSH2-203ENST00000394848 ZNF365Q70YC5 407 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
SSH2-203ENST00000394848 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms