RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 FAM167AQ96KS9 214 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 MECRQ9BV79 373 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 BTBD7Q9P203 1132 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ZWINTO95229 277 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ENO1P06733 434 aaKnown RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 ITGAVP06756 1048 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 LCP1P13796 627 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SAT1P21673 171 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SESN2P58004 480 aaPredicted RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 ZC3H12AQ5D1E8 599 aaKnown RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 METTL7BQ6UX53 244 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 MOB2Q70IA6 237 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ACAP3Q96P50 834 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 TRIM56Q9BRZ2 755 aaKnown RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 SPATC1LQ9H0A9 340 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 C2orf40Q9H1Z8 148 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SLC24A2Q9UI40 661 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 GRID1Q9ULK0 1009 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 DRG1Q9Y295 367 aaKnown RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 TTLL3Q9Y4R7 772 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 MYH9P35579 1960 aaKnown RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 SIPA1L1O43166 1804 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ARHGAP42A6NI28 874 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SIGLEC16A6NMB1 481 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 MSCO60682 206 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ATP5HO75947 161 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 KRT37O76014 449 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 RBL1P28749 1068 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 NDST1P52848 882 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF268Q14587 947 aaPredicted RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 ANKRD20A2Q5SQ80 823 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ANKRD20A1Q5TYW2 823 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 RNF43Q68DV7 783 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ARID3BQ8IVW6 561 aaPredicted RBP11□□□□□ -0.65
ACTN1-203ENST00000394419 HIPK4Q8NE63 616 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 CHST13Q8NET6 341 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 TMEM176AQ96HP8 235 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 SHCBP1LQ9BZQ2 653 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 STARD13Q9Y3M8 1113 aa11□□□□□ -0.65
ACTN1-203ENST00000394419 MYO18AQ92614 2054 aaKnown RBP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 MAFO75444 373 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 MYL2P10916 166 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 GPD1P21695 349 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 KCNA3P22001 575 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 PAX7P23759 505 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 PDE1BQ01064 536 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 OASLQ15646 514 aaKnown RBP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 ZCCHC23Q6ZST2 131 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 APOBEC3FQ8IUX4 373 aaKnown RBP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 NUDCD3Q8IVD9 361 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 AGGF1Q8N302 714 aaeCLIP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 PCYT2Q99447 389 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 KLC2Q9H0B6 622 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 CDT1Q9H211 546 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 MINDY3Q9H8M7 445 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 RSAD1Q9HA92 442 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 PDGFCQ9NRA1 345 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 CYTH4Q9UIA0 394 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 NDC80O14777 642 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 ARIH2O95376 493 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 HMGCRP04035 888 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 ABHD2P08910 425 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 ALDH18A1P54886 795 aaKnown RBP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 CRADDP78560 199 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 VGLL4Q14135 290 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TMEM132DQ14C87 1099 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TSNAXIP1Q2TAA8 658 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 AGR3Q8TD06 166 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 DEPDC1BQ8WUY9 529 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 FAM161BQ96MY7 647 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TSPAN16Q9UKR8 245 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 G3BP2Q9UN86 482 aaKnown RBP10.99□□□□□ -0.65
ACTN1-203ENST00000394419 ACTL7BQ9Y614 415 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 CLUHO75153 1309 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TCRBV9S1A1TA0A576 114 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 SOWAHBA6NEL2 793 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 PHKA2P46019 1235 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 OAZ1P54368 228 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 GOLGA7BQ2TAP0 167 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TNFAIP8L3Q5GJ75 292 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 LRRC38Q5VT99 294 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 BBS12Q6ZW61 710 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 LMNTD2Q8IXW0 634 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 C1orf127Q8N9H9 656 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 DNERQ8NFT8 737 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 FAM172AQ8WUF8 416 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 TMEM120AQ9BXJ8 343 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 YIPF3Q9GZM5 350 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 R3HDMLQ9H3Y0 253 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 ARHGEF3Q9NR81 526 aa10.99□□□□□ -0.65
ACTN1-203ENST00000394419 THSD7AQ9UPZ6 1657 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 FAM237BA0A1B0GVD1 139 aa10.98□□□□□ -0.65
ACTN1-203ENST00000394419 CCDC78A2IDD5 438 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms