RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 FBXO25Q8TCJ0 367 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 CCDC114Q96M63 670 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 ZIM3Q96PE6 472 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 NCAPGQ9BPX3 1015 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 PAAF1Q9BRP4 392 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 PTCH2Q9Y6C5 1203 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 BRCA2P51587 3418 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 KBTBD13C9JR72 458 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 INPPL1O15357 1258 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 OPA1O60313 960 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 PAX3P23760 479 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 SDC4P31431 198 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 C15orf59Q2T9L4 293 aaPredicted RBP23.26■■□□□ 1.31
HMGA2-203ENST00000393578 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 PIK3R5Q8WYR1 880 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 CFAP57Q96MR6 1250 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 SH3GL2Q99962 352 aa23.26■■□□□ 1.31
HMGA2-203ENST00000393578 LIASO43766 372 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 HSD17B3P37058 310 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 PLCB3Q01970 1234 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 DHX9Q08211 1270 aaKnown RBP23.25■■□□□ 1.31
HMGA2-203ENST00000393578 TUSC3Q13454 348 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 MBTPS1Q14703 1052 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 KCTD6Q8NC69 237 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 ART4Q93070 314 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 UROC1Q96N76 676 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 SEZ6LQ9BYH1 1024 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 WHRNQ9P202 907 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 NEU2Q9Y3R4 380 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 PRPSAP2O60256 369 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 PPFIA2O75334 1257 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 EOMESO95936 686 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 LCP1P13796 627 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 NPR3P17342 541 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 IBSPP21815 317 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-203ENST00000393578 CALCOCO2Q13137 446 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 TIGD5Q53EQ6 642 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 MDH1BQ5I0G3 518 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 KIAA0319Q5VV43 1072 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 PAQR9Q6ZVX9 377 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 SPATA18Q8TC71 538 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 RIN2Q8WYP3 895 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-203ENST00000393578 PEBP4Q96S96 227 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 FAM118BQ9BPY3 351 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.25■■□□□ 1.31
HMGA2-203ENST00000393578 MTRF1LQ9UGC7 380 aaKnown RBP23.25■■□□□ 1.31
HMGA2-203ENST00000393578 ASIC3Q9UHC3 531 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 INPP5FQ9Y2H2 1132 aa23.25■■□□□ 1.31
HMGA2-203ENST00000393578 RNF40O75150 1001 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 B3GAT3O94766 335 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 ODC1P11926 461 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 BYSLQ13895 437 aaKnown RBP23.24■■□□□ 1.31
HMGA2-203ENST00000393578 SPDYCQ5MJ68 293 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 CYP4V2Q6ZWL3 525 aaPredicted RBP23.24■■□□□ 1.31
HMGA2-203ENST00000393578 SLC24A5Q71RS6 500 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 PIGZQ86VD9 579 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 GOLGA6L1Q8N7Z2 621 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 HSPH1Q92598 858 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 SYT15Q9BQS2 421 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 TXLNGYQ9BZA5 131 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 CRTAC1Q9NQ79 661 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 CDH9Q9ULB4 789 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 FAN1Q9Y2M0 1017 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 CEP350Q5VT06 3117 aa23.24■■□□□ 1.31
HMGA2-203ENST00000393578 C9IYK1 514 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 ITIH2P19823 946 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 PTPN9P43378 593 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 ATP11AP98196 1134 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 UAP1Q16222 522 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 CDO1Q16878 200 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 BOLA3Q53S33 107 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 RTN4RL1Q86UN2 441 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 CLEC4CQ8WTT0 213 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 FAM172AQ8WUF8 416 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 KCTD13Q8WZ19 329 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 FRMD8P1Q9BZ68 369 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 VPS18Q9P253 973 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 DRG1Q9Y295 367 aaKnown RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 TRIM17Q9Y577 477 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 TIMM13Q9Y5L4 95 aaPredicted RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 TDRD15B5MCY1 1934 aaKnown RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 CLDN5O00501 218 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 PCSK1P29120 753 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 CCDC142Q17RM4 750 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 EFHC1Q5JVL4 640 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 BBS12Q6ZW61 710 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 ZNF365Q70YC5 407 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 CCDC89Q8N998 374 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 SNF8Q96H20 258 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 MED10Q9BTT4 135 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 NGRNQ9NPE2 291 aaKnown RBP23.23■■□□□ 1.31
HMGA2-203ENST00000393578 DNPEPQ9ULA0 475 aa23.23■■□□□ 1.31
HMGA2-203ENST00000393578 ENDOD1O94919 500 aa23.22■■□□□ 1.31
HMGA2-203ENST00000393578 FAM200BP0CF97 657 aa23.22■■□□□ 1.31
HMGA2-203ENST00000393578 IVDP26440 423 aa23.22■■□□□ 1.31
HMGA2-203ENST00000393578 LRIG3Q6UXM1 1119 aa23.22■■□□□ 1.31
HMGA2-203ENST00000393578 TTC13Q8NBP0 860 aa23.22■■□□□ 1.31
HMGA2-203ENST00000393578 TEKT4Q8WW24 435 aa23.22■■□□□ 1.31
HMGA2-203ENST00000393578 NKD2Q969F2 451 aaPredicted RBP23.22■■□□□ 1.31
HMGA2-203ENST00000393578 TBCBQ99426 244 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms