RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 RNF40O75150 1001 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 NFATC1O95644 943 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 BDNFP23560 247 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 EIF2DP41214 584 aaKnown RBP13.16□□□□□ -0.3
CTSC-202ENST00000393301 IFNAR2P48551 515 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 GALK1P51570 392 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 CDR1P51861 262 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 AP3M2P53677 418 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 USP46P62068 366 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
CTSC-202ENST00000393301 ZXDBP98169 803 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
CTSC-202ENST00000393301 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
CTSC-202ENST00000393301 SH3RF2Q8TEC5 729 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 CD101Q93033 1021 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 CYP2S1Q96SQ9 504 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
CTSC-202ENST00000393301 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 DMAC2Q9NW81 257 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 TRPM5Q9NZQ8 1165 aa13.16□□□□□ -0.3
CTSC-202ENST00000393301 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
CTSC-202ENST00000393301 ABCA7Q8IZY2 2146 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 RPP40O75818 363 aaKnown RBP13.15□□□□□ -0.3
CTSC-202ENST00000393301 KIF20AO95235 890 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 ADRB1P08588 477 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 ZNF806P0C7X5 589 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 HDCP19113 662 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 HOXC13P31276 330 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 GNL1P36915 607 aaPredicted RBP13.15□□□□□ -0.3
CTSC-202ENST00000393301 OPRD1P41143 372 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 PPP1R2P41236 205 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 TUBP50607 506 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 NR1H3Q13133 447 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 CUL4BQ13620 913 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 LPAL2Q16609 132 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 NFIL3Q16649 462 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 KNOP1Q1ED39 458 aaKnown RBP13.15□□□□□ -0.3
CTSC-202ENST00000393301 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
CTSC-202ENST00000393301 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
CTSC-202ENST00000393301 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
CTSC-202ENST00000393301 A0A0A0MRY4 1105 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 F8VP50 259 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 LEFTY2O00292 366 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 TM4SF5O14894 197 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 SMC2O95347 1197 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 DLATP10515 647 aaKnown RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 TNNI1P19237 187 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 PTMSP20962 102 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 ANXA13P27216 316 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 GRIK1P39086 918 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 ENPEPQ07075 957 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 HEATR6Q6AI08 1181 aaKnown RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 CEP68Q76N32 757 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 RASSF3Q86WH2 238 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 DDX42Q86XP3 938 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTSC-202ENST00000393301 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 PDZD8Q8NEN9 1154 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 PLEKHO2Q8TD55 490 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
CTSC-202ENST00000393301 MMS19Q96T76 1030 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 SNX25Q9H3E2 840 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 MYH10P35580 1976 aa13.14□□□□□ -0.31
CTSC-202ENST00000393301 TNRC6BQ9UPQ9 1833 aaKnown RBP13.13□□□□□ -0.31
CTSC-202ENST00000393301 SLC9A3R1O14745 358 aaPredicted RBP13.13□□□□□ -0.31
CTSC-202ENST00000393301 TNFRSF10BO14763 440 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 AXIN1O15169 862 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 CLIC2O15247 247 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
CTSC-202ENST00000393301 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
CTSC-202ENST00000393301 APBB3O95704 486 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 MBD3O95983 291 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
CTSC-202ENST00000393301 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 CACNA2D1P54289 1103 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 MYL6P60660 151 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 TNNC1P63316 161 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 DMC1Q14565 340 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 PLK5Q496M5 336 aa13.13□□□□□ -0.31
CTSC-202ENST00000393301 TDRD10Q5VZ19 366 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms