RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 TMEM121Q9BTD3 319 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 ASCC2Q9H1I8 757 aaPredicted RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 ABHD16BQ9H3Z7 469 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 LRRC40Q9H9A6 602 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 CCDC78A2IDD5 438 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 H7C4K7 107 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 TIMM44O43615 452 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 HYIQ5T013 277 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 FAXCQ5TGI0 409 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 MTIF3Q9H2K0 278 aaKnown RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 PRG3Q9Y2Y8 225 aaPredicted RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 NFASCO94856 1347 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 ZBTB39O15060 712 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 ALDH1A3P47895 512 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 RGS4P49798 205 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 SLC25A41Q8N5S1 370 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 PCYOX1LQ8NBM8 494 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 TSC22D3Q99576 134 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 SLC39A10Q9ULF5 831 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 BTNL10A8MVZ5 291 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 HOXA2O43364 376 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 KRT16P08779 473 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 INPP5AQ14642 412 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 FAM83EQ2M2I3 478 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 CATSPERGQ6ZRH7 1159 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 EMC1Q8N766 993 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 GDF3Q9NR23 364 aa13.11□□□□□ -0.31
CLTC-202ENST00000393043 AFF4Q9UHB7 1163 aaKnown RBP13.11□□□□□ -0.31
CLTC-202ENST00000393043 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 LRRC43Q8N309 656 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 SHCBP1Q8NEM2 672 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 ETNPPLQ8TBG4 499 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 OSMRQ99650 979 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 WDR18Q9BV38 432 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.1□□□□□ -0.31
CLTC-202ENST00000393043 PDHXO00330 501 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 H2AFYO75367 372 aaKnown RBP13.1□□□□□ -0.31
CLTC-202ENST00000393043 SLC11A2P49281 568 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 CASP5P51878 434 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 FAM111AQ96PZ2 611 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 PHTF1Q9UMS5 762 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 ASTN1O14525 1302 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 B2RBV5 119 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
CLTC-202ENST00000393043 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
CLTC-202ENST00000393043 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
CLTC-202ENST00000393043 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 KDM4CQ9H3R0 1056 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 MOSPD1Q9UJG1 213 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 ZMYM2Q9UBW7 1377 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 O00370 1275 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 PDHA1P08559 390 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 PYGMP11217 842 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 NBPF20Q3BBV1 942 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 USP13Q92995 863 aaPredicted RBP13.1□□□□□ -0.31
CLTC-202ENST00000393043 OLFM3Q96PB7 478 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 HSD17B14Q9BPX1 270 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 PCDHGB4Q9UN71 923 aa13.1□□□□□ -0.31
CLTC-202ENST00000393043 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 H3BQF6 201 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 ZNF286BP0CG31 522 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 SERPINB8P50452 374 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 RAB27AP51159 221 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 NDST1P52848 882 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 TAF2Q6P1X5 1199 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 GANQ9H2C0 597 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 SETD4Q9NVD3 440 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 GPATCH2LQ9NWQ4 482 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 KCNA1Q09470 495 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 FBXW10Q5XX13 1052 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 TMC3Q7Z5M5 1100 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 ARID3BQ8IVW6 561 aaPredicted RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 LRRC4BQ9NT99 713 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 CYP39A1Q9NYL5 469 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 TRPC5OSA6NMA1 111 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 DNALI1O14645 258 aaPredicted RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 SNHG28P0DPA3 235 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 PPP3CAQ08209 521 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms