RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 FAM47CQ5HY64 1035 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 CEP128Q6ZU80 1094 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 KCTD6Q8NC69 237 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 SLC35B2Q8TB61 432 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 FAM118BQ9BPY3 351 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 SEMA4AQ9H3S1 761 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 GOLGA2P5Q9HBQ8 144 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 ZNF148Q9UQR1 794 aa21.04■□□□□ 0.96
PTPN11-202ENST00000392597 TULP2O00295 520 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 ACADSBP45954 432 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 TRIM32Q13049 653 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 TRIP13Q15645 432 aaPredicted RBP21.03■□□□□ 0.96
PTPN11-202ENST00000392597 KRT71Q3SY84 523 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 KCNT1Q5JUK3 1230 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 TRNP1Q6NT89 227 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 FBXO46Q6PJ61 603 aaPredicted RBP21.03■□□□□ 0.96
PTPN11-202ENST00000392597 LEKR1Q6ZMV7 388 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 WNT8BQ93098 351 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 CAPS2Q9BXY5 557 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 RSAD1Q9HA92 442 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 AAASQ9NRG9 546 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 PCSK1NQ9UHG2 260 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 PAPSS1O43252 624 aaPredicted RBP21.03■□□□□ 0.96
PTPN11-202ENST00000392597 RIPK2O43353 540 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 ENDOD1O94919 500 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 INHAP05111 366 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 SLC29A2Q14542 456 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 CCSAPQ6IQ19 270 aaPredicted RBP21.03■□□□□ 0.96
PTPN11-202ENST00000392597 ARFGAP2Q8N6H7 521 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 PIWIL1Q96J94 861 aaKnown RBP21.03■□□□□ 0.96
PTPN11-202ENST00000392597 HSFY1Q96LI6 401 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 GIT1Q9Y2X7 761 aa21.03■□□□□ 0.96
PTPN11-202ENST00000392597 PRPSAP2O60256 369 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 ASGR1P07306 291 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 PDGFRBP09619 1106 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 LMO2P25791 158 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 CCDC14Q49A88 953 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 RELL1Q8IUW5 271 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 TEKT4Q8WW24 435 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 KHSRPQ92945 711 aaKnown RBP eCLIP21.02■□□□□ 0.963e-6■■□□□ 11.4
PTPN11-202ENST00000392597 TBCBQ99426 244 aa21.02■□□□□ 0.96
PTPN11-202ENST00000392597 PIK3R2O00459 728 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CST8O60676 142 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 GABBR2O75899 941 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CCDC130P13994 396 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 SDC4P31431 198 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 KCNA10Q16322 511 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 BOLA3Q53S33 107 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 IZUMO3Q5VZ72 239 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 HIBCHQ6NVY1 386 aaPredicted RBP21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CYP4V2Q6ZWL3 525 aaPredicted RBP21.01■□□□□ 0.95
PTPN11-202ENST00000392597 SLC26A9Q7LBE3 791 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 MRPL10Q7Z7H8 261 aaKnown RBP21.01■□□□□ 0.95
PTPN11-202ENST00000392597 VSIG1Q86XK7 387 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 PGM2Q96G03 612 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 ZFP42Q96MM3 310 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 PEBP4Q96S96 227 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CENPHQ9H3R5 247 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 PCDH9Q9HC56 1237 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 APOC4-APOC2K7ER74 178 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 APOC2P02655 101 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CTSHP09668 335 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 PTPN9P43378 593 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 ZNF618Q5T7W0 954 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CCDC25Q86WR0 208 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 SCUBE3Q8IX30 993 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 PCSK9Q8NBP7 692 aaKnown RBP21.01■□□□□ 0.95
PTPN11-202ENST00000392597 B3GALNT2Q8NCR0 500 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 GSTCDQ8NEC7 633 aa21.01■□□□□ 0.95
PTPN11-202ENST00000392597 HNRNPABQ99729 332 aaKnown RBP21.01■□□□□ 0.95
PTPN11-202ENST00000392597 TSPYL2Q9H2G4 693 aaPredicted RBP21.01■□□□□ 0.95
PTPN11-202ENST00000392597 CYB561D2O14569 222 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 GABRDO14764 452 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 HCRTO43612 131 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 SHBGP04278 402 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 THP07101 528 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 ADORA2BP29275 332 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 CCND3P30281 292 aaPredicted RBP21■□□□□ 0.95
PTPN11-202ENST00000392597 VPS41P49754 854 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 RAB27AP51159 221 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 ARSEP51690 589 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 OTUD4Q01804 1114 aaKnown RBP21■□□□□ 0.95
PTPN11-202ENST00000392597 PDK2Q15119 407 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 C15orf59Q2T9L4 293 aaPredicted RBP21■□□□□ 0.95
PTPN11-202ENST00000392597 P3H1Q32P28 736 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 MAP7D3Q8IWC1 876 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 ACTL9Q8TC94 416 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 SH3TC2Q8TF17 1288 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 HSPH1Q92598 858 aa21■□□□□ 0.95
PTPN11-202ENST00000392597 CDC42EP4Q9H3Q1 356 aaKnown RBP21■□□□□ 0.95
PTPN11-202ENST00000392597 ERICH4A6NGS2 130 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 DNALI1O14645 258 aaPredicted RBP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 XPO1O14980 1071 aaKnown RBP20.99■□□□□ 0.95
PTPN11-202ENST00000392597 ZNF623O75123 536 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 GRAP2O75791 330 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 CD48P09326 243 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 CHKAP35790 457 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 IRAK1P51617 712 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 PLCB3Q01970 1234 aa20.99■□□□□ 0.95
PTPN11-202ENST00000392597 PTGISQ16647 500 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms