RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 AP3M2P53677 418 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 ZXDBP98169 803 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 CUL4BQ13620 913 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 SF3A2Q15428 464 aaKnown RBP28.1■■■□□ 2.09
NPHP3-202ENST00000383282 ELF2Q15723 593 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 CCDC6Q16204 474 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 ATL3Q6DD88 541 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 DDX42Q86XP3 938 aaKnown RBP eCLIP28.1■■■□□ 2.09
NPHP3-202ENST00000383282 ATP8B3O60423 1300 aa28.1■■■□□ 2.09
NPHP3-202ENST00000383282 RALGAPA1Q6GYQ0 2036 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 RHOBTB1O94844 696 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 OLFM2O95897 454 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 LIMK1P53667 647 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 PLK5Q496M5 336 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 RESP18Q5W5W9 173 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 FILIP1Q7Z7B0 1213 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 NUP93Q8N1F7 819 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 PDZD8Q8NEN9 1154 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 TSTD1Q8NFU3 115 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 RNF38Q9H0F5 515 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 XYLT2Q9H1B5 865 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 SMPD4Q9NXE4 827 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 CFAP45Q9UL16 551 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 ANAPC1Q9H1A4 1944 aa28.09■■■□□ 2.09
NPHP3-202ENST00000383282 SPTBN2O15020 2390 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 ATG2BQ96BY7 2078 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 RTN3O95197 1032 aaPredicted RBP28.08■■■□□ 2.09
NPHP3-202ENST00000383282 OAS1P00973 400 aaKnown RBP28.08■■■□□ 2.09
NPHP3-202ENST00000383282 MBL2P11226 248 aaPredicted RBP28.08■■■□□ 2.09
NPHP3-202ENST00000383282 YWHAQP27348 245 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 MPLP40238 635 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 OPRD1P41143 372 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 DGKEP52429 567 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 CACNA2D1P54289 1103 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 ZNF699Q32M78 642 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 ZNF667Q5HYK9 610 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 OVCA2Q8WZ82 227 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 FBXO32Q969P5 355 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 TNIP3Q96KP6 325 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 CNTNAP3BQ96NU0 1288 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 B3GNT5Q9BYG0 378 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 CNTNAP3Q9BZ76 1288 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 GZF1Q9H116 711 aaPredicted RBP28.08■■■□□ 2.09
NPHP3-202ENST00000383282 VRTNQ9H8Y1 702 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 GREB1Q4ZG55 1949 aa28.08■■■□□ 2.09
NPHP3-202ENST00000383282 CLDN5O00501 218 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 CASP4P49662 377 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 SEC13P55735 322 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 USP33Q8TEY7 942 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 MED10Q9BTT4 135 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 VPS45Q9NRW7 570 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 EXOC1Q9NV70 894 aa28.07■■■□□ 2.08
NPHP3-202ENST00000383282 CYP17A1P05093 508 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 KCNA4P22459 653 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 DHCR24Q15392 516 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 C2orf27AQ580R0 203 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 PLA2G2CQ5R387 149 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 C11orf74Q86VG3 221 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 ADGRG2Q8IZP9 1017 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 PARD3BQ8TEW8 1205 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 DUSP15Q9H1R2 295 aaPredicted RBP28.06■■■□□ 2.08
NPHP3-202ENST00000383282 SMYD3Q9H7B4 428 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 TMEM30AQ9NV96 361 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 CFAP97Q9P2B7 532 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 TBC1D14Q9P2M4 693 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 PTPRDP23468 1912 aa28.06■■■□□ 2.08
NPHP3-202ENST00000383282 K7EQS6 105 aa28.05■■■□□ 2.08
NPHP3-202ENST00000383282 GBP1P32455 592 aa28.05■■■□□ 2.08
NPHP3-202ENST00000383282 NCOA4Q13772 614 aa28.05■■■□□ 2.08
NPHP3-202ENST00000383282 USP39Q53GS9 565 aaKnown RBP28.05■■■□□ 2.08
NPHP3-202ENST00000383282 SDK1Q7Z5N4 2213 aa28.05■■■□□ 2.08
NPHP3-202ENST00000383282 GRAMD1CQ8IYS0 662 aa28.05■■■□□ 2.08
NPHP3-202ENST00000383282 SERTAD1Q9UHV2 236 aa28.05■■■□□ 2.08
NPHP3-202ENST00000383282 HELZP42694 1942 aaKnown RBP28.04■■■□□ 2.08
NPHP3-202ENST00000383282 LRRIQ3A6PVS8 624 aaPredicted RBP28.04■■■□□ 2.08
NPHP3-202ENST00000383282 ADH1CP00326 375 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 SLFN14P0C7P3 912 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 P4HA1P13674 534 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 EIF2DP41214 584 aaKnown RBP28.04■■■□□ 2.08
NPHP3-202ENST00000383282 CDH8P55286 799 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 MRPS21P82921 87 aaKnown RBP28.04■■■□□ 2.08
NPHP3-202ENST00000383282 SCARA5Q6ZMJ2 495 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 FAM35AQ86V20 835 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 PLEKHO2Q8TD55 490 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 PNKPQ96T60 521 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 DMAP1Q9NPF5 467 aaPredicted RBP28.04■■■□□ 2.08
NPHP3-202ENST00000383282 MMP17Q9ULZ9 603 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 SPAG17Q6Q759 2223 aa28.04■■■□□ 2.08
NPHP3-202ENST00000383282 DCLK1O15075 740 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 SLC5A3P53794 718 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 CREB5Q02930 508 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 GAB4Q2WGN9 574 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 SMARCD1Q96GM5 515 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 KCNK16Q96T55 309 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 SMOC1Q9H4F8 434 aa28.03■■■□□ 2.08
NPHP3-202ENST00000383282 SCAMP3O14828 347 aaKnown RBP28.02■■■□□ 2.08
NPHP3-202ENST00000383282 C4BPAP04003 597 aaKnown RBP28.02■■■□□ 2.08
NPHP3-202ENST00000383282 APODP05090 189 aa28.02■■■□□ 2.08
NPHP3-202ENST00000383282 CLDN10P78369 228 aa28.02■■■□□ 2.08
NPHP3-202ENST00000383282 STK4Q13043 487 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms