RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 A8MXQ7 604 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 CKMP06732 381 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 CNR2P34972 360 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 ID4P47928 161 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 SLC7A9P82251 487 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 FOXK2Q01167 660 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 ADAM9Q13443 819 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 SGSM1Q2NKQ1 1148 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 EML3Q32P44 896 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 ZNF667Q5HYK9 610 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 ANKRD40Q6AI12 368 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 PAQR9Q6ZVX9 377 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 FAM186BQ8IYM0 893 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 KIAA2013Q8IYS2 634 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 GPR161Q8N6U8 529 aaKnown RBP20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 TAF4BQ92750 862 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 EEF2KMTQ96G04 330 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 ZNF518BQ9C0D4 1074 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 SMYD3Q9H7B4 428 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 ECT2Q9H8V3 914 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 DUS2Q9NX74 493 aaKnown RBP20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 IL37Q9NZH6 218 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 KIAA1468Q9P260 1216 aa20.11■□□□□ 0.81
TMEM88B-201ENST00000378821 PSMA7O14818 248 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 TGM1P22735 817 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 GJA4P35212 333 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 CDH8P55286 799 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 GRSF1Q12849 480 aaKnown RBP eCLIP20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 BIRC3Q13489 604 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 STIM1Q13586 685 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 ZNF699Q32M78 642 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 SV2AQ7L0J3 742 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 ERMP1Q7Z2K6 904 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 LONP2Q86WA8 852 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 ZC3H3Q8IXZ2 948 aaKnown RBP20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 SH3RF2Q8TEC5 729 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 ATP2A3Q93084 1043 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 TSG101Q99816 390 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 RNF38Q9H0F5 515 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 SDCBP2Q9H190 292 aa20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 FBRSL1Q9HCM7 1045 aaKnown RBP20.1■□□□□ 0.81
TMEM88B-201ENST00000378821 CHURC1-FNTBB4DL54 471 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 PPP1R3GB7ZBB8 358 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 TNFRSF10BO14763 440 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 HRO43593 1189 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 ASS1P00966 412 aaKnown RBP20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 OAS1P00973 400 aaKnown RBP20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 TRIM49P0CI25 452 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 TRIM49CP0CI26 452 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 DRD1P21728 446 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 PSMC2P35998 433 aaKnown RBP20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 GALK1P51570 392 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 LRRC63Q05C16 580 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 DMWDQ09019 674 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 SNX30Q5VWJ9 437 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 KLHL10Q6JEL2 608 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 CRYBG2Q8N1P7 616 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 CPA6Q8N4T0 437 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 OVCA2Q8WZ82 227 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 DHTKD1Q96HY7 919 aaPredicted RBP20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 TNIP3Q96KP6 325 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 NCDNQ9UBB6 729 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 CTNND2Q9UQB3 1225 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 KIAA1549LQ6ZVL6 1849 aa20.09■□□□□ 0.81
TMEM88B-201ENST00000378821 MYO16Q9Y6X6 1858 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 CCDC163A0A0D9SF12 145 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 FAM92AA1XBS5 289 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 CLDN5O00501 218 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 CETN3O15182 167 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 PPP1R2P41236 205 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 VAMP7P51809 220 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 TAF10Q12962 218 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 PKN3Q6P5Z2 889 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 INTS8Q75QN2 995 aaKnown RBP20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 UNC93AQ86WB7 457 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 NUP93Q8N1F7 819 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 TRIML1Q8N9V2 468 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 GPT2Q8TD30 523 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 SECISBP2LQ93073 1101 aaKnown RBP20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 RMDN1Q96DB5 314 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 P2RY13Q9BPV8 354 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 HINFPQ9BQA5 517 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 LINC00597Q9H2U6 94 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 COMMD8Q9NX08 183 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 WNT6Q9Y6F9 365 aa20.08■□□□□ 0.81
TMEM88B-201ENST00000378821 ATG13O75143 517 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 RTN3O95197 1032 aaPredicted RBP20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 EGFP01133 1207 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 KRT13P13646 458 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 P4HA1P13674 534 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 RAP1GAPP47736 663 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 FNTBP49356 437 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 FKBP3Q00688 224 aaKnown RBP20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 FBXO43Q4G163 708 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 LAIR1Q6GTX8 287 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 WDR5BQ86VZ2 330 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 FUKQ8N0W3 1084 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 NELFBQ8WX92 580 aa20.07■□□□□ 0.8
TMEM88B-201ENST00000378821 EZH1Q92800 747 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms