RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 STAT1P42224 750 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 GPD2P43304 727 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 PLA2G4AP47712 749 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 PPP3CCP48454 512 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 KIF11P52732 1056 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 TEAD2Q15562 447 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 RAB41Q5JT25 222 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 GPRIN1Q7Z2K8 1008 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 PIGZQ86VD9 579 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 TDRD5Q8NAT2 981 aaKnown RBP19.79■□□□□ 0.76
SSU72-203ENST00000378725 ADAMTS19Q8TE59 1207 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 ING5Q8WYH8 240 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 KCTD13Q8WZ19 329 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 OVCA2Q8WZ82 227 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 SPAG5Q96R06 1193 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 TTYH3Q9C0H2 523 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 FBXO44Q9H4M3 255 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 MYO6Q9UM54 1294 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 PCDHGC3Q9UN70 934 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 USP3Q9Y6I4 520 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 TULP2O00295 520 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 CBFA2T2O43439 604 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 CYP11B1P15538 503 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 SP100P23497 879 aaPredicted RBP19.78■□□□□ 0.76
SSU72-203ENST00000378725 TAF10Q12962 218 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 SARM1Q6SZW1 724 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 CACNA2D4Q7Z3S7 1137 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 BAP1Q92560 729 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 SECISBP2LQ93073 1101 aaKnown RBP19.78■□□□□ 0.76
SSU72-203ENST00000378725 MCRS1Q96EZ8 462 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 ZSWIM3Q96MP5 696 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 GCNAQ96QF7 691 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 NUP58Q9BVL2 599 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 ZMYM5Q9UJ78 669 aa19.78■□□□□ 0.76
SSU72-203ENST00000378725 NCANO14594 1321 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 M0QYV0 167 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 GFPT2O94808 682 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 TPM3P06753 285 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 CFHP08603 1231 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 DDX6P26196 483 aaKnown RBP eCLIP19.77■□□□□ 0.76
SSU72-203ENST00000378725 WEE1P30291 646 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 SSTR3P32745 418 aaPredicted RBP19.77■□□□□ 0.76
SSU72-203ENST00000378725 RPL34P49207 117 aaKnown RBP19.77■□□□□ 0.76
SSU72-203ENST00000378725 ARHGAP15Q53QZ3 475 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 SNX30Q5VWJ9 437 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 DENND1BQ6P3S1 775 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 STK32AQ8WU08 396 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 DDX1Q92499 740 aaKnown RBP19.77■□□□□ 0.76
SSU72-203ENST00000378725 HSFY1Q96LI6 401 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 NECAB3Q96P71 396 aaPredicted RBP19.77■□□□□ 0.76
SSU72-203ENST00000378725 SLITRK1Q96PX8 696 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 LHX5Q9H2C1 402 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 TASP1Q9H6P5 420 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 TRPM5Q9NZQ8 1165 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 SCML2Q9UQR0 700 aa19.77■□□□□ 0.76
SSU72-203ENST00000378725 ZNF840PA6NDX5 716 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 ANHXE9PGG2 379 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 AP5Z1O43299 807 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 GABBR2O75899 941 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 ZDHHC11BP0C7U3 371 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 CYP4F8P98187 520 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 STXBP5Q5T5C0 1151 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 GPR158Q5T848 1215 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 PM20D1Q6GTS8 502 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 PMF1Q6P1K2 205 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 MON1AQ86VX9 555 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 GJD3Q8N144 294 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 WDTC1Q8N5D0 677 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 PDZD8Q8NEN9 1154 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 MRPS31Q92665 395 aaKnown RBP19.76■□□□□ 0.75
SSU72-203ENST00000378725 FBXO32Q969P5 355 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 IQCDQ96DY2 449 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 UHRF1Q96T88 793 aaPredicted RBP19.76■□□□□ 0.75
SSU72-203ENST00000378725 SLC46A2Q9BY10 475 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 CD320Q9NPF0 282 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 LIMD1Q9UGP4 676 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 CHORDC1Q9UHD1 332 aaPredicted RBP19.76■□□□□ 0.75
SSU72-203ENST00000378725 ITIH6Q6UXX5 1313 aa19.76■□□□□ 0.75
SSU72-203ENST00000378725 DOCK6Q96HP0 2047 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 A0A1W2PQJ5 194 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 PFKLP17858 780 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 KRT9P35527 623 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 IFRD2Q12894 506 aaPredicted RBP19.75■□□□□ 0.75
SSU72-203ENST00000378725 TXNDC8Q6A555 127 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 CCDC186Q7Z3E2 898 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 NOP9Q86U38 636 aaKnown RBP19.75■□□□□ 0.75
SSU72-203ENST00000378725 ZNF677Q86XU0 584 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 SCML4Q8N228 414 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 EPS8L1Q8TE68 723 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 NXPE3Q969Y0 559 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 ASB16Q96NS5 453 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 TRPV4Q9HBA0 871 aa19.75■□□□□ 0.75
SSU72-203ENST00000378725 NOCTQ9UK39 431 aaKnown RBP19.75■□□□□ 0.75
SSU72-203ENST00000378725 PDE6CP51160 858 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 TKTL1P51854 596 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 FAM78AQ5JUQ0 283 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 IRF2BP2Q7Z5L9 587 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 FMNL3Q8IVF7 1028 aa19.74■□□□□ 0.75
SSU72-203ENST00000378725 ZSCAN18Q8TBC5 510 aaPredicted RBP19.74■□□□□ 0.75
SSU72-203ENST00000378725 SMARCD2Q92925 531 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms