RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DDX20Q9UHI6 824 aaKnown RBP15.6■□□□□ 0.09
NPHP4-201ENST00000378156 DEAF1O75398 565 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-201ENST00000378156 POLBP06746 335 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 ADORA2AP29274 412 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 GEMIN4P57678 1058 aaKnown RBP15.59■□□□□ 0.09
NPHP4-201ENST00000378156 PPP3CAQ08209 521 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 OVGP1Q12889 678 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 PPP1R2P1Q96PQ5 205 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 TMEM121Q9BTD3 319 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 WDCPQ9H6R7 721 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 LSM8O95777 96 aaKnown RBP15.59■□□□□ 0.09
NPHP4-201ENST00000378156 IFI35P80217 286 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-201ENST00000378156 GRIK4Q16099 956 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 TMEM176AQ96HP8 235 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 KPNA6O60684 536 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
NPHP4-201ENST00000378156 ALDH1A3P47895 512 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 BCAT1P54687 386 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 VGLL4Q14135 290 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 FLOT2Q14254 428 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 NCLNQ969V3 563 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 CDCA5Q96FF9 252 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 RIPK2O43353 540 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 KDM1AO60341 852 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 IFNA8P32881 189 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 USP10Q14694 798 aaKnown RBP15.59■□□□□ 0.09
NPHP4-201ENST00000378156 TMCO5AQ8N6Q1 288 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 TMEM169Q96HH4 297 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 KCTD10Q9H3F6 313 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 DYRK4Q9NR20 520 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
NPHP4-201ENST00000378156 ACKR2O00590 384 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF263O14978 683 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 SNRPAP09012 282 aaKnown RBP15.58■□□□□ 0.09
NPHP4-201ENST00000378156 GFAPP14136 432 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 IL10P22301 178 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 SPRP35270 261 aaPredicted RBP15.58■□□□□ 0.09
NPHP4-201ENST00000378156 HARS2P49590 506 aaKnown RBP15.58■□□□□ 0.09
NPHP4-201ENST00000378156 PSMD7P51665 324 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 STX3Q13277 289 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 LAMB3Q13751 1172 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 NPY5RQ15761 445 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 PCSK7Q16549 785 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 ANGPTL8Q6UXH0 198 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 ADGRF2Q8IZF7 708 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 ABRAQ8N0Z2 381 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 DNAJC9Q8WXX5 260 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 PPP2R3CQ969Q6 453 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 MTBPQ96DY7 904 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 NOD2Q9HC29 1040 aa15.58■□□□□ 0.09
NPHP4-201ENST00000378156 FMN2Q9NZ56 1722 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 F9P00740 461 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 PTGER2P43116 358 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TFDP3Q5H9I0 405 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 NUDT18Q6ZVK8 323 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 ARRDC4Q8NCT1 418 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 IPMKQ8NFU5 416 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TRAPPC12Q8WVT3 735 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 SNX19Q92543 992 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 L3MBTL3Q96JM7 780 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CNPY3Q9BT09 278 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 MUC3BQ9H195 1237 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TEKT2Q9UIF3 430 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CYP3A7-CYP3A51PA0A087WV96 503 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 MANSC4A6NHS7 340 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TBC1D12O60347 775 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 SLC2A3P11169 496 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CYP3A7P24462 503 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 OTUD4Q01804 1114 aaKnown RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 FBXO47Q5MNV8 452 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 LNX1Q8TBB1 728 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 USP6NLQ92738 828 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 WDR18Q9BV38 432 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TBC1D23Q9NUY8 699 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 AFF4Q9UHB7 1163 aaKnown RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TSR3Q9UJK0 312 aaKnown RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 PHTF1Q9UMS5 762 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 FAM208AQ9UK61 1670 aaKnown RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 E2F8A0AVK6 867 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 PIK3CDO00329 1044 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 DAB1O75553 588 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 PSMD10O75832 226 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 TARSP26639 723 aaKnown RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CNGA3Q16281 694 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CCNG2Q16589 344 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CATSPERGQ6ZRH7 1159 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 USP50Q70EL3 339 aaPredicted RBP15.58■□□□□ 0.08
NPHP4-201ENST00000378156 EMC1Q8N766 993 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 CCDC90BQ9GZT6 254 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 MANSC1Q9H8J5 431 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 ARHGEF38Q9NXL2 777 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 SLC30A1Q9Y6M5 507 aa15.58■□□□□ 0.08
NPHP4-201ENST00000378156 RAP1GAPP47736 663 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 CYLC2Q14093 348 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 PAN2Q504Q3 1202 aaKnown RBP15.57■□□□□ 0.08
NPHP4-201ENST00000378156 NAPEPLDQ6IQ20 393 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 EXD1Q8NHP7 514 aa15.57■□□□□ 0.08
NPHP4-201ENST00000378156 TFB1MQ8WVM0 346 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms