RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GOLGA8MH3BSY2 632 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 AXLP30530 894 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 RGS2P41220 211 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 PSEN2P49810 448 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 CPT1AP50416 773 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 EIF3EP60228 445 aaKnown RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 IFT88Q13099 833 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 FASTKD3Q14CZ7 662 aaKnown RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 ALKAL1Q6UXT8 129 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 CACNA2D3Q8IZS8 1091 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 SPATA18Q8TC71 538 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 TMEM40Q8WWA1 233 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 DYDC1Q8WWB3 177 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 PRCCQ92733 491 aaPredicted RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 SEC16BQ96JE7 1060 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 TRIP12Q14669 1992 aaPredicted RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 SLC10A3P09131 477 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 DRD4P21917 467 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 SNX16P57768 344 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 ZNF200P98182 395 aaPredicted RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 MMRN1Q13201 1228 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 IRF5Q13568 498 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 SNX17Q15036 470 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 SOWAHAQ2M3V2 549 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 PKDCCQ504Y2 493 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 RAB6CQ53S08 254 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 FBXO47Q5MNV8 452 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 OLFML1Q6UWY5 402 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 UNC93AQ86WB7 457 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 SCUBE3Q8IX30 993 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 MGARPQ8TDB4 240 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 PPM1EQ8WY54 764 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 CABS1Q96KC9 395 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 ZNF317Q96PQ6 595 aaPredicted RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 RAB6CQ9H0N0 254 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 KCNK9Q9NPC2 374 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 NGRNQ9NPE2 291 aaKnown RBP21.16■□□□□ 0.98
VSX1-202ENST00000376709 KLK14Q9P0G3 267 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 LGALS13Q9UHV8 139 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 GJD2Q9UKL4 321 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 NAALADL1Q9UQQ1 740 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 NME7Q9Y5B8 376 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 FOXO6A8MYZ6 492 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 TNPO2O14787 897 aaKnown RBP21.15■□□□□ 0.98
VSX1-202ENST00000376709 TREHO43280 583 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 SETSIPP0DME0 302 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 CREB1P16220 341 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 DESP17661 470 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 PDIA2Q13087 525 aaKnown RBP21.15■□□□□ 0.98
VSX1-202ENST00000376709 HIF1AQ16665 826 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 SCYL2Q6P3W7 929 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 SESTD1Q86VW0 696 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 PPIL6Q8IXY8 311 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 C7orf31Q8N865 590 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.15■□□□□ 0.98
VSX1-202ENST00000376709 APBA2Q99767 749 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 VPS37BQ9H9H4 285 aa21.15■□□□□ 0.98
VSX1-202ENST00000376709 CD4P01730 458 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 RBP3P10745 1247 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 SDC4P31431 198 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 SLC6A3Q01959 620 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 KRT81Q14533 505 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 CCDC14Q49A88 953 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 RNF187Q5TA31 235 aaPredicted RBP21.14■□□□□ 0.98
VSX1-202ENST00000376709 CAPN12Q6ZSI9 719 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 CYP4V2Q6ZWL3 525 aaPredicted RBP21.14■□□□□ 0.98
VSX1-202ENST00000376709 YTHDF3Q7Z739 585 aaKnown RBP21.14■□□□□ 0.98
VSX1-202ENST00000376709 MAP7D3Q8IWC1 876 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 CYP4X1Q8N118 509 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 FAM71DQ8N9W8 422 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 SLC35F5Q8WV83 523 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 SLC4A5Q9BY07 1137 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 AP5M1Q9H0R1 490 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 DPEP3Q9H4B8 488 aa21.14■□□□□ 0.98
VSX1-202ENST00000376709 FARP1Q9Y4F1 1045 aaPredicted RBP21.14■□□□□ 0.98
VSX1-202ENST00000376709 PDCD11Q14690 1871 aaKnown RBP21.14■□□□□ 0.98
VSX1-202ENST00000376709 BRAFP15056 766 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 ADAM17P78536 824 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 CRHR2Q13324 411 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 DPYSL3Q14195 570 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 LRRC14Q15048 493 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 TMEM110Q86TL2 294 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 TAX1BP1Q86VP1 789 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 UNC45BQ8IWX7 931 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 SRRM1Q8IYB3 904 aaKnown RBP21.14■□□□□ 0.97
VSX1-202ENST00000376709 MICALL1Q8N3F8 863 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 TAB3Q8N5C8 712 aaPredicted RBP21.14■□□□□ 0.97
VSX1-202ENST00000376709 P3H4Q92791 437 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 CCDC134Q9H6E4 229 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 ZFYVE28Q9HCC9 887 aa21.14■□□□□ 0.97
VSX1-202ENST00000376709 SMIM28A0A1B0GU29 152 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 HAS3O00219 553 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 RPL22P35268 128 aaKnown RBP21.13■□□□□ 0.97
VSX1-202ENST00000376709 TFDP2Q14188 446 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 TMED2Q15363 201 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 FAM47CQ5HY64 1035 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 VSTM1Q6UX27 236 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 CCDC13Q8IYE1 715 aa21.13■□□□□ 0.97
VSX1-202ENST00000376709 RIBC1Q8N443 379 aaPredicted RBP21.13■□□□□ 0.97
VSX1-202ENST00000376709 ANKRD42Q8N9B4 389 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms