RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ROR1Q01973 937 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 PTPN11Q06124 597 aaPredicted RBP15.2■□□□□ 0.02
MSH5-201ENST00000375703 KBTBD12Q3ZCT8 623 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 WDR78Q5VTH9 848 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 BZW1Q7L1Q6 419 aaKnown RBP15.2■□□□□ 0.02
MSH5-201ENST00000375703 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 TMEM192Q8IY95 271 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 EXOC8Q8IYI6 725 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 STK32AQ8WU08 396 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 PTPRN2Q92932 1015 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 FZD8Q9H461 694 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 KANSL3Q9P2N6 904 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 HEY2Q9UBP5 337 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 LNPEPQ9UIQ6 1025 aa15.2■□□□□ 0.02
MSH5-201ENST00000375703 IGKV6-21A0A0C4DH24 114 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 TCRBV9S1A1TA0A576 114 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
MSH5-201ENST00000375703 INHBAP08476 426 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 GNAZP19086 355 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 CDH6P55285 790 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
MSH5-201ENST00000375703 FAAP100Q0VG06 881 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 WASHC2DQ5SRD0 308 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 FAM102AQ5T9C2 384 aaPredicted RBP15.19■□□□□ 0.02
MSH5-201ENST00000375703 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 NCAPG2Q86XI2 1143 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 TMEM130Q8N3G9 435 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 TMEM176AQ96HP8 235 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 SERAC1Q96JX3 654 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 NUDCD1Q96RS6 583 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 BTBD7Q9P203 1132 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 ZBTB42B2RXF5 422 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 KBTBD13C9JR72 458 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 KIF1CO43896 1103 aaKnown RBP15.19■□□□□ 0.02
MSH5-201ENST00000375703 HNRNPCL1O60812 293 aaKnown RBP15.19■□□□□ 0.02
MSH5-201ENST00000375703 IL18RAPO95256 599 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 GM2AP17900 193 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 GABRB2P47870 512 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 ARFIP2P53365 341 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 CTC1Q2NKJ3 1217 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 HSDL1Q3SXM5 330 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 SH3PXD2AQ5TCZ1 1133 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 APOBEC3FQ8IUX4 373 aaKnown RBP15.19■□□□□ 0.02
MSH5-201ENST00000375703 C1orf127Q8N9H9 656 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 SLC44A1Q8WWI5 657 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 FAF2Q96CS3 445 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 HEXIM2Q96MH2 286 aaKnown RBP15.19■□□□□ 0.02
MSH5-201ENST00000375703 ELOVL4Q9GZR5 314 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 SMYD3Q9H7B4 428 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 HMGXB4Q9UGU5 601 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 TEX264Q9Y6I9 313 aa15.19■□□□□ 0.02
MSH5-201ENST00000375703 H7C0C1 242 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 M0QYV0 167 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 NOP56O00567 594 aaKnown RBP15.18■□□□□ 0.02
MSH5-201ENST00000375703 PYGBP11216 843 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 GPD2P43304 727 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 ATP5OP48047 213 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TAF11Q15544 211 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 DPH6Q7L8W6 267 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 RIOX2Q8IUF8 465 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 UBA3Q8TBC4 463 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TTC17Q96AE7 1141 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 FAM111AQ96PZ2 611 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 PEBP4Q96S96 227 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 GPR20Q99678 358 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TUBB6Q9BUF5 446 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSH5-201ENST00000375703 TNS1Q9HBL0 1735 aaKnown RBP15.18■□□□□ 0.02
MSH5-201ENST00000375703 CFAP69A5D8W1 941 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 LACTBL1A8MY62 500 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 AVILO75366 819 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 ITGB3P05106 788 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 NFICP08651 508 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TPBGLP0DKB5 382 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 PCK1P35558 622 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 ZNF143P52747 638 aaPredicted RBP15.18■□□□□ 0.02
MSH5-201ENST00000375703 TFDP2Q14188 446 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 NOMO1Q15155 1222 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 SH3D19Q5HYK7 790 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 FAM182AQ5T1J6 154 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TREML2Q5T2D2 321 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 C1orf228Q6PIY5 440 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 CDT1Q9H211 546 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 DENND2DQ9H6A0 471 aaPredicted RBP15.18■□□□□ 0.02
MSH5-201ENST00000375703 TLE6Q9H808 572 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.18■□□□□ 0.02
MSH5-201ENST00000375703 LCTP09848 1927 aa15.18■□□□□ 0.02
MSH5-201ENST00000375703 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.17■□□□□ 0.02
MSH5-201ENST00000375703 E7ENQ6 273 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 CILPO75339 1184 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 ENDOD1O94919 500 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 DHRS4L1P0CG22 281 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 NEK3P51956 506 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 ZBTB16Q05516 673 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 SLC18A2Q05940 514 aa15.17■□□□□ 0.02
MSH5-201ENST00000375703 KCNJ11Q14654 390 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms