RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 SLC38A7Q9NVC3 462 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 POLR3BQ9NW08 1133 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 DPP3Q9NY33 737 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 FBXL5Q9UKA1 691 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ITGA11Q9UKX5 1188 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 PTPRJQ12913 1337 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ITIH6Q6UXX5 1313 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PDCD11Q14690 1871 aaKnown RBP8.23□□□□□ -1.09
SP140-202ENST00000373645 GREB1Q4ZG55 1949 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 HEPACAM2A8MVW5 462 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 PODXLO00592 558 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 MAN2B1O00754 1011 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 HLA-DRAP01903 254 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 KRT19P08727 400 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 OR4Q2P0C623 313 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 ATF2P15336 505 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 PSMC3P17980 439 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 ATICP31939 592 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 CXCL12P48061 93 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 RBP5P82980 135 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TWF1Q12792 350 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 NCOA4Q13772 614 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TRIM14Q14142 442 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 SGSM1Q2NKQ1 1148 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 FIGNQ5HY92 759 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 KLHDC7AQ5VTJ3 777 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TCEAL6Q6IPX3 200 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 PDXDC1Q6P996 788 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 PDZD4Q76G19 769 aaPredicted RBP8.23□□□□□ -1.09
SP140-202ENST00000373645 TMC6Q7Z403 805 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TCEAL8Q8IYN2 117 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TTC9BQ8N6N2 239 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 NEK11Q8NG66 645 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 SHKBP1Q8TBC3 707 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TAS1R2Q8TE23 839 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TAF4BQ92750 862 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 SEMA4DQ92854 862 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 SMARCD2Q92925 531 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 IRF7Q92985 503 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 TCEAL3Q969E4 200 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 EDEM3Q9BZQ6 932 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 CRISPLD1Q9H336 500 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 GCNT4Q9P109 453 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 IMPACTQ9P2X3 320 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 AGAP1Q9UPQ3 857 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 DAAM1Q9Y4D1 1078 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 CEP295Q9C0D2 2601 aa8.23□□□□□ -1.09
SP140-202ENST00000373645 KIF26AQ9ULI4 1882 aaPredicted RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 FASNP49327 2511 aaKnown RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 A0A1W2PRU2 124 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 ANO9A1A5B4 782 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 GOLGA6L6A8MZA4 724 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 PIRO00625 290 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TM4SF5O14894 197 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 LRP3O75074 770 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 STAU1O95793 577 aaKnown RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 ITGB3P05106 788 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TPM1P09493 284 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TRIM21P19474 475 aaKnown RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 LRPAP1P30533 357 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 ELF1P32519 619 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 CTHP32929 405 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 RPL9P32969 192 aaKnown RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 PIK3CAP42336 1068 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 KLK7P49862 253 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 NRLP54845 237 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 MYL6P60660 151 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TNK2Q07912 1038 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 CCDC173Q0VFZ6 552 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TBX2Q13207 712 aaPredicted RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 CTXN3Q4LDR2 81 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 DPY19L2P1Q6NXN4 242 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TRIM65Q6PJ69 517 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 RNF19BQ6ZMZ0 732 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 TMC8Q8IU68 726 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 SPEM1Q8N4L4 309 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 ZNF397Q8NF99 534 aaPredicted RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 CPLX3Q8WVH0 158 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 FAXDC2Q96IV6 333 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 PDLIM2Q96JY6 352 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 FAM84AQ96KN4 292 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 FAM81BQ96LP2 452 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 UROC1Q96N76 676 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 NT5C1BQ96P26 610 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 LSM14BQ9BX40 385 aaKnown RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 LRRC3Q9BY71 257 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 IMPG2Q9BZV3 1241 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 ARRDC1-AS1Q9H2J1 176 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 SLITRK6Q9H5Y7 841 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 SIX2Q9NPC8 291 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 FAM207AQ9NSI2 230 aaPredicted RBP8.22□□□□□ -1.09
SP140-202ENST00000373645 GTSE1Q9NYZ3 720 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 ANGPTL2Q9UKU9 493 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 CAPN11Q9UMQ6 739 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 YIPF1Q9Y548 306 aa8.22□□□□□ -1.09
SP140-202ENST00000373645 PCDHGA4Q9Y5G9 962 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms