RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 BBOF1Q8ND07 529 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 ACTL9Q8TC94 416 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 SLC2A14Q8TDB8 520 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 LPPQ93052 612 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 CAPS2Q9BXY5 557 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 DNAH12Q6ZR08 3092 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 KIF3CO14782 793 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 ITGAVP06756 1048 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 RPL34P49207 117 aaKnown RBP20.53■□□□□ 0.88
HDAC1-201ENST00000373548 SNX16P57768 344 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 ATP11AP98196 1134 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 TRMT10CQ7L0Y3 403 aaKnown RBP20.53■□□□□ 0.88
HDAC1-201ENST00000373548 ZDHHC17Q8IUH5 632 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 TSPYL2Q9H2G4 693 aaPredicted RBP20.53■□□□□ 0.88
HDAC1-201ENST00000373548 CDC42EP4Q9H3Q1 356 aaKnown RBP20.53■□□□□ 0.88
HDAC1-201ENST00000373548 THSD7BQ9C0I4 1608 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 CYB561D2O14569 222 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 ENDOD1O94919 500 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 ZSCAN5DPP0CG00 497 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 ETS1P14921 441 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 TKTP29401 623 aaKnown RBP20.52■□□□□ 0.88
HDAC1-201ENST00000373548 THPOP40225 353 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 OTUD4Q01804 1114 aaKnown RBP20.52■□□□□ 0.88
HDAC1-201ENST00000373548 NOGQ13253 232 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 PTGISQ16647 500 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 P3H1Q32P28 736 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 HACE1Q8IYU2 909 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 CCHCR1Q8TD31 782 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 CLEC4CQ8WTT0 213 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 TNIP3Q96KP6 325 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 SLC38A7Q9NVC3 462 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 MIOSQ9NXC5 875 aa20.52■□□□□ 0.88
HDAC1-201ENST00000373548 BCCIPQ9P287 314 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC1-201ENST00000373548 GPR182O15218 404 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 ATP2C2O75185 946 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 RPLP2P05387 115 aaKnown RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 CST5P28325 142 aaPredicted RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 ARSEP51690 589 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 SP3Q02447 781 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 CCDC142Q17RM4 750 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 WSCD1Q658N2 575 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 HIBCHQ6NVY1 386 aaPredicted RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 RFX6Q8HWS3 928 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 TTC13Q8NBP0 860 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 B3GALNT2Q8NCR0 500 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 PWWP2AQ96N64 755 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 TMEM121Q9BTD3 319 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 DNAI2Q9GZS0 605 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 TSPYL1Q9H0U9 437 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 ADAM7Q9H2U9 754 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 GPBP1L1Q9HC44 474 aaPredicted RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 PRPSAP2O60256 369 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 SDC4P31431 198 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 IRAK1P51617 712 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 PLCB3Q01970 1234 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 AGMOQ6ZNB7 445 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 HOOK3Q86VS8 718 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 UHMK1Q8TAS1 419 aaKnown RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 FAM172AQ8WUF8 416 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 DDX23Q9BUQ8 820 aaKnown RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 FRMD8P1Q9BZ68 369 aaPredicted RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 RSAD1Q9HA92 442 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 NGRNQ9NPE2 291 aaKnown RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 CYLDQ9NQC7 956 aa20.51■□□□□ 0.87
HDAC1-201ENST00000373548 DNAJC17Q9NVM6 304 aaKnown RBP20.51■□□□□ 0.87
HDAC1-201ENST00000373548 CAND2O75155 1236 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 THP07101 528 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 CD52P31358 61 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 CDH6P55285 790 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 MMRN1Q13201 1228 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 TTC19Q6DKK2 380 aaPredicted RBP20.5■□□□□ 0.87
HDAC1-201ENST00000373548 LEKR1Q6ZMV7 388 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 SLC26A9Q7LBE3 791 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 PKNOX2Q96KN3 472 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 PADI3Q9ULW8 664 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 NOVA2Q9UNW9 492 aaKnown RBP20.5■□□□□ 0.87
HDAC1-201ENST00000373548 ARL5CA6NH57 179 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 DCDC2CA8MYV0 355 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 DNALI1O14645 258 aaPredicted RBP20.5■□□□□ 0.87
HDAC1-201ENST00000373548 GABRDO14764 452 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 LCP1P13796 627 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 ACAT1P24752 427 aaKnown RBP20.5■□□□□ 0.87
HDAC1-201ENST00000373548 HPDP32754 393 aaPredicted RBP20.5■□□□□ 0.87
HDAC1-201ENST00000373548 GNGT1P63211 74 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 LRRC31Q6UY01 552 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 FUKQ8N0W3 1084 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 HNRNPABQ99729 332 aaKnown RBP20.5■□□□□ 0.87
HDAC1-201ENST00000373548 TMEM109Q9BVC6 243 aa20.5■□□□□ 0.87
HDAC1-201ENST00000373548 APOC4-APOC2K7ER74 178 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 SGK1O00141 431 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 MGEA5O60502 916 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 APOC2P02655 101 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 FAM163BP0C2L3 166 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 GHRP10912 638 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 PECAM1P16284 738 aaPredicted RBP20.49■□□□□ 0.87
HDAC1-201ENST00000373548 SCNN1AP37088 669 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 GPS1Q13098 491 aa20.49■□□□□ 0.87
HDAC1-201ENST00000373548 DPYSL3Q14195 570 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms