RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 P4HA1P13674 534 aa21.64■■□□□ 1.06
SYNC-201ENST00000373484 CPB1P15086 417 aa21.64■■□□□ 1.06
SYNC-201ENST00000373484 WARSP23381 471 aaKnown RBP21.64■■□□□ 1.06
SYNC-201ENST00000373484 TPGS2Q68CL5 300 aa21.64■■□□□ 1.06
SYNC-201ENST00000373484 SPATA31D4Q6ZUB0 917 aa21.64■■□□□ 1.06
SYNC-201ENST00000373484 KREMEN2Q8NCW0 462 aa21.64■■□□□ 1.06
SYNC-201ENST00000373484 GDAP1L1Q96MZ0 367 aa21.64■■□□□ 1.06
SYNC-201ENST00000373484 APOBEC3GQ9HC16 384 aaKnown RBP21.64■■□□□ 1.06
SYNC-201ENST00000373484 UNC80Q8N2C7 3258 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 H3BQ06 376 aaPredicted RBP21.64■■□□□ 1.05
SYNC-201ENST00000373484 OR4Q2P0C623 313 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 HOXB8P17481 243 aaPredicted RBP21.64■■□□□ 1.05
SYNC-201ENST00000373484 ANXA13P27216 316 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 CFAP58Q5T655 872 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 SYCE2Q6PIF2 218 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 CACNA2D4Q7Z3S7 1137 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 C3orf20Q8ND61 904 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 ACBD6Q9BR61 282 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 MRPL45Q9BRJ2 306 aaKnown RBP21.64■■□□□ 1.05
SYNC-201ENST00000373484 ZCWPW1Q9H0M4 648 aa21.64■■□□□ 1.05
SYNC-201ENST00000373484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.64■■□□□ 1.05
SYNC-201ENST00000373484 PTPRDP23468 1912 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 EPHB6O15197 1021 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 ATF2P15336 505 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 ASPAP45381 313 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 GTF2A1P52655 376 aaPredicted RBP21.63■■□□□ 1.05
SYNC-201ENST00000373484 TFF2Q03403 129 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 GPR17Q13304 367 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 LEXMQ3ZCV2 418 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 TTMPQ5BVD1 217 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 ELMSAN1Q6PJG2 1045 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 LRIG3Q6UXM1 1119 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 TSEN2Q8NCE0 465 aaKnown RBP21.63■■□□□ 1.05
SYNC-201ENST00000373484 SMYD3Q9H7B4 428 aa21.63■■□□□ 1.05
SYNC-201ENST00000373484 HMGB1P1B2RPK0 211 aaPredicted RBP21.62■■□□□ 1.05
SYNC-201ENST00000373484 SFMBT2Q5VUG0 894 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 SCARA5Q6ZMJ2 495 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 SMRP1Q8NCR6 262 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 BCO2Q9BYV7 579 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 NIF3L1Q9GZT8 377 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 SDCBP2Q9H190 292 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 SFXN1Q9H9B4 322 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 RBM12Q9NTZ6 932 aaKnown RBP21.62■■□□□ 1.05
SYNC-201ENST00000373484 AFF4Q9UHB7 1163 aaKnown RBP21.62■■□□□ 1.05
SYNC-201ENST00000373484 CD207Q9UJ71 328 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 HCRTO43612 131 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 LMO2P25791 158 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 PCSK1P29120 753 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 CDH8P55286 799 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 CETN1Q12798 172 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 WDR44Q5JSH3 913 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 RNF19BQ6ZMZ0 732 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 FAXDC2Q96IV6 333 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 ZIM3Q96PE6 472 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 MAFFQ9ULX9 164 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 NME7Q9Y5B8 376 aa21.62■■□□□ 1.05
SYNC-201ENST00000373484 VNN2O95498 520 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 ACAT1P24752 427 aaKnown RBP21.61■■□□□ 1.05
SYNC-201ENST00000373484 GNL1P36915 607 aaPredicted RBP21.61■■□□□ 1.05
SYNC-201ENST00000373484 RAP1GAPP47736 663 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 TSPY1Q01534 308 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 CLUL1Q15846 466 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 SLC39A12Q504Y0 691 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 INTS6LQ5JSJ4 861 aaKnown RBP21.61■■□□□ 1.05
SYNC-201ENST00000373484 MEI1Q5TIA1 1274 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 LIN9Q5TKA1 542 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 LRRTM3Q86VH5 581 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 S1PR5Q9H228 398 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 SNX25Q9H3E2 840 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 AIPL1Q9NZN9 384 aa21.61■■□□□ 1.05
SYNC-201ENST00000373484 C5orf42Q9H799 3197 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 DOCK6Q96HP0 2047 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 PAPLNO95428 1278 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 C8AP07357 584 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 ADCY1Q08828 1119 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 SLC18A3Q16572 532 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 IFI16Q16666 785 aaKnown RBP21.6■■□□□ 1.05
SYNC-201ENST00000373484 RTL10Q7L3V2 364 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 TCEAL8Q8IYN2 117 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 DCP1BQ8IZD4 617 aaKnown RBP21.6■■□□□ 1.05
SYNC-201ENST00000373484 ARFGAP2Q8N6H7 521 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 C12orf76Q8N812 135 aaPredicted RBP21.6■■□□□ 1.05
SYNC-201ENST00000373484 CMASQ8NFW8 434 aaPredicted RBP21.6■■□□□ 1.05
SYNC-201ENST00000373484 OR6B3Q8NGW1 331 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.6■■□□□ 1.05
SYNC-201ENST00000373484 LMO3Q8TAP4 145 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 ARL8AQ96BM9 186 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 PGLYRP2Q96PD5 576 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 PKMYT1Q99640 499 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 EPN3Q9H201 632 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 ZDHHC7Q9NXF8 308 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 SALL4Q9UJQ4 1053 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 CDH9Q9ULB4 789 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 DENND4AQ7Z401 1863 aa21.6■■□□□ 1.05
SYNC-201ENST00000373484 MTMR11A4FU01 709 aa21.59■■□□□ 1.05
SYNC-201ENST00000373484 RFPL2O75678 378 aa21.59■■□□□ 1.05
SYNC-201ENST00000373484 HSPA9P38646 679 aaKnown RBP21.59■■□□□ 1.05
SYNC-201ENST00000373484 SLC7A5Q01650 507 aa21.59■■□□□ 1.05
SYNC-201ENST00000373484 KCNMA1Q12791 1236 aa21.59■■□□□ 1.05
SYNC-201ENST00000373484 AAK1Q2M2I8 961 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms