RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 KIAA1328Q86T90 577 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 CDCA3Q99618 268 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-204ENST00000372243 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 THAP2Q9H0W7 228 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 PLEKHA4Q9H4M7 779 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 SYNCQ9H7C4 482 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 COMMD8Q9NX08 183 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 DPP7Q9UHL4 492 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 MTCL1Q9Y4B5 1905 aaKnown RBP16.69■□□□□ 0.26
TMEM53-204ENST00000372243 NCANO14594 1321 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 BTNL10A8MVZ5 291 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 PRRG1O14668 218 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 FBXO21O94952 628 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 CSPG5O95196 566 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 ERBB2P04626 1255 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 ATF6P18850 670 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 ABCB4P21439 1286 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 SCNN1AP37088 669 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TKTL1P51854 596 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 KIF5AQ12840 1032 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 PLD1Q13393 1074 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 XYLT1Q86Y38 959 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 NUP93Q8N1F7 819 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 SLC22A17Q8WUG5 538 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 IL37Q9NZH6 218 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 YIPF1Q9Y548 306 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 INSL5Q9Y5Q6 135 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 USP3Q9Y6I4 520 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 A0A0A6YYK5 440 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-204ENST00000372243 RFXAPO00287 272 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 CCP110O43303 1012 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 RTN3O95197 1032 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-204ENST00000372243 CYP1A2P05177 515 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 RRM1P23921 792 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 ALDH1A3P47895 512 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 SLC5A3P53794 718 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TCEAL1Q15170 157 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 DUSP6Q16828 381 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 PLEKHA7Q6IQ23 1121 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 DENND5BQ6ZUT9 1274 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 GPRIN1Q7Z2K8 1008 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 SIX6OS1Q8N1H7 587 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 C3orf20Q8ND61 904 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 ZNF653Q96CK0 615 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TSGA10Q9BZW7 698 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TLE6Q9H808 572 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 EHD2Q9NZN4 543 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TJP2Q9UDY2 1190 aa16.68■□□□□ 0.26
TMEM53-204ENST00000372243 CNOT8Q9UFF9 292 aaKnown RBP16.68■□□□□ 0.26
TMEM53-204ENST00000372243 TCRBV5S1A1TA0A578 114 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 FAM92AA1XBS5 289 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 PAPSS1O43252 624 aaPredicted RBP16.67■□□□□ 0.26
TMEM53-204ENST00000372243 SART1O43290 800 aaKnown RBP16.67■□□□□ 0.26
TMEM53-204ENST00000372243 GPR15P49685 360 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 ADIGQ0VDE8 80 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 C2CD6Q53TS8 623 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 CYP4A22Q5TCH4 519 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 PM20D1Q6GTS8 502 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 ELMSAN1Q6PJG2 1045 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 ADGRD2Q7Z7M1 963 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 RHOT2Q8IXI1 618 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 RFFLQ8WZ73 363 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 IRGQQ8WZA9 623 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 FBXO44Q9H4M3 255 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 MRPL47Q9HD33 250 aaKnown RBP16.67■□□□□ 0.26
TMEM53-204ENST00000372243 PARVAQ9NVD7 372 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.67■□□□□ 0.26
TMEM53-204ENST00000372243 SCINQ9Y6U3 715 aa16.67■□□□□ 0.26
TMEM53-204ENST00000372243 GREB1Q4ZG55 1949 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 GOLGA6L9A6NEM1 432 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 KRT86O43790 486 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 SOAT2O75908 522 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 ZBED1O96006 694 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 C8AP07357 584 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 CSH1P0DML2 217 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 CSH2P0DML3 217 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 LCP1P13796 627 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 POU3F3P20264 500 aaPredicted RBP16.66■□□□□ 0.26
TMEM53-204ENST00000372243 HOXA9P31269 272 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 MRPS5P82675 430 aaKnown RBP16.66■□□□□ 0.26
TMEM53-204ENST00000372243 SLC6A3Q01959 620 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 OR6B2Q6IFH4 312 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 OLFML1Q6UWY5 402 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 FAM183BPQ6ZVS7 135 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 SCUBE3Q8IX30 993 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
TMEM53-204ENST00000372243 SLC7A14Q8TBB6 771 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 ARHGEF26Q96DR7 871 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 CALR3Q96L12 384 aaKnown RBP16.66■□□□□ 0.26
TMEM53-204ENST00000372243 TTLL2Q9BWV7 592 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 LACRTQ9GZZ8 138 aa16.66■□□□□ 0.26
TMEM53-204ENST00000372243 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms