RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.82■□□□□ 0.12
GTF3C4-201ENST00000372146 TJP2Q9UDY2 1190 aa15.82■□□□□ 0.12
GTF3C4-201ENST00000372146 ASXL2Q76L83 1435 aa15.82■□□□□ 0.12
GTF3C4-201ENST00000372146 CASZ1Q86V15 1759 aa15.82■□□□□ 0.12
GTF3C4-201ENST00000372146 BTDP43251 543 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 C5orf22Q49AR2 442 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 ATP6AP1LQ52LC2 224 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 SULT1C3Q6IMI6 304 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 MZT2AQ6P582 158 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 COLGALT2Q8IYK4 626 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 EFHBQ8N7U6 833 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 MXD3Q9BW11 206 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 TSEN34Q9BSV6 310 aaKnown RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 EHD1Q9H4M9 534 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 SIK3Q9Y2K2 1263 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 XRCC4Q13426 336 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 KNOP1Q1ED39 458 aaKnown RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 SYTL5Q8TDW5 730 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 PIGSQ96S52 555 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 NCF1BA6NI72 391 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 NCF1CA8MVU1 366 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 NCF1P14598 390 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 GTF2IP78347 998 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 NFYCQ13952 458 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 ZSCAN18Q8TBC5 510 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 MAP4K1Q92918 833 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 ISCUQ9H1K1 167 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 H3BN98 237 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 MOCS2O96007 188 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 S100ZQ8WXG8 99 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 TRIM62Q9BVG3 475 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 SLC12A4Q9UP95 1085 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 IL12AP29459 219 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 GYG1P46976 350 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 SH2B2O14492 632 aaPredicted RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 CHP2O43745 196 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 RGS4P49798 205 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 MPP2Q14168 576 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 ESRP1Q6NXG1 681 aaKnown RBP15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 CPA5Q8WXQ8 436 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 RPS6KB2Q9UBS0 482 aa15.81■□□□□ 0.12
GTF3C4-201ENST00000372146 SULT1E1P49888 294 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ZKSCAN4Q969J2 545 aaPredicted RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 SPON2Q9BUD6 331 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 MAPRE3Q9UPY8 281 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 OR6B1O95007 311 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 CCNA2P20248 432 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 PTRHD1Q6GMV3 140 aaKnown RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ADSSL1Q8N142 457 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 CAMKK1Q8N5S9 505 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 FAR2Q96K12 515 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 NUDT5Q9UKK9 219 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 TFECO14948 347 aaPredicted RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 INPP4BO15327 924 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ZFP1Q6P2D0 407 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 SKA1Q96BD8 255 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 CDHR1Q96JP9 859 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 CMTM6Q9NX76 183 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 LIN7AO14910 233 aaPredicted RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 KYQ8NBH2 561 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 SYNPO2Q9UMS6 1093 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 hCG_1984214I3L0E3 225 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 PAICSP22234 425 aaKnown RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ZNF613Q6PF04 617 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ZNF713Q8N859 430 aaPredicted RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 INTS2Q9H0H0 1204 aaKnown RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 CLTBP09497 229 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 NIM1KQ8IY84 436 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 CNPY3Q9BT09 278 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 RIBC2Q9H4K1 309 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ATXN10Q9UBB4 475 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 NUDT12Q9BQG2 462 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 ADD3Q9UEY8 706 aaKnown RBP15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 YEATS2Q9ULM3 1422 aa15.8■□□□□ 0.12
GTF3C4-201ENST00000372146 POTEMA6NI47 508 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 CLOCKO15516 846 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 PSMD3O43242 534 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 NDUFB5O43674 189 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 GUCY1A2P33402 732 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 TTC29Q8NA56 475 aaPredicted RBP15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 POMGNT2Q8NAT1 580 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 CUEDC1Q9NWM3 386 aaPredicted RBP15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 VBP1P61758 197 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 CCDC166P0CW27 439 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 YWHAQP27348 245 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 TWF1Q12792 350 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 SMTNL2Q2TAL5 461 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 SETD9Q8NE22 299 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 LRRC20Q8TCA0 184 aa15.79■□□□□ 0.12
GTF3C4-201ENST00000372146 RFT1Q96AA3 541 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms