RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CUL1Q13616 776 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 SMC1AQ14683 1233 aaKnown RBP18.39■□□□□ 0.53
SSBP3-203ENST00000371319 DUPD1Q68J44 220 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 CYP4V2Q6ZWL3 525 aaPredicted RBP18.39■□□□□ 0.53
SSBP3-203ENST00000371319 SLC26A9Q7LBE3 791 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 FAM35AQ86V20 835 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 METTL23Q86XA0 190 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 DDX42Q86XP3 938 aaKnown RBP eCLIP18.39■□□□□ 0.53
SSBP3-203ENST00000371319 MYCBPAPQ8TBZ2 947 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 KCTD13Q8WZ19 329 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 CAVIN3Q969G5 261 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 PCED1BQ96HM7 432 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 CFAP57Q96MR6 1250 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 PEBP4Q96S96 227 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 PKMYT1Q99640 499 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 CHST7Q9NS84 486 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 KRT82Q9NSB4 513 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 NLRC5Q86WI3 1866 aa18.39■□□□□ 0.53
SSBP3-203ENST00000371319 hCG_1818297A0A087WSY0 165 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 TMEM189-UBE2V1I3L0A0 370 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 DAPK3O43293 454 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 RNF8O76064 485 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAM200BP0CF97 657 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 TYMPP19971 482 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 CETN2P41208 172 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 TNNT3P45378 269 aaPredicted RBP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ADCY2Q08462 1091 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ADCY1Q08828 1119 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 TAZQ16635 292 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 SMTNL2Q2TAL5 461 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 EMBQ6PCB8 327 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAM43BQ6ZT52 329 aaPredicted RBP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 SND1Q7KZF4 910 aaKnown RBP eCLIP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ARCQ7LC44 396 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ATG4AQ8WYN0 398 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 APBB2Q92870 758 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 GDAP1L1Q96MZ0 367 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 SMOQ99835 787 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ACBD6Q9BR61 282 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 ERP44Q9BS26 406 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 RAB17Q9H0T7 212 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 OGFRQ9NZT2 677 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 KANSL3Q9P2N6 904 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 PCSK1NQ9UHG2 260 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 USP18Q9UMW8 372 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 PCDHB8Q9UN66 801 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 UTP11Q9Y3A2 253 aaKnown RBP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 TET1Q8NFU7 2136 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 LRRD1A4D1F6 860 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAM153BP0C7A2 387 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 KRT10P13645 584 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 KCNJ1P48048 391 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 CDR1P51861 262 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAAP100Q0VG06 881 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 NNTQ13423 1086 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAM153CQ494X1 144 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 INTS6LQ5JSJ4 861 aaKnown RBP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 CMASQ8NFW8 434 aaPredicted RBP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 SLCO2A1Q92959 643 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 SCLYQ96I15 445 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 C11orf84Q9BUA3 381 aaPredicted RBP18.38■□□□□ 0.53
SSBP3-203ENST00000371319 NEUROG2Q9H2A3 272 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 FAM153AQ9UHL3 310 aa18.38■□□□□ 0.53
SSBP3-203ENST00000371319 PTPRDP23468 1912 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 RRP9O43818 475 aaKnown RBP18.37■□□□□ 0.53
SSBP3-203ENST00000371319 AP1G2O75843 785 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 CXCL10P02778 98 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 KDELR1P24390 212 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 PTPN9P43378 593 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 RABGGTBP53611 331 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 CACNA2D1P54289 1103 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 MAP3K7CLP57077 242 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 SLC8A3P57103 927 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 ADIGQ0VDE8 80 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 SNX1Q13596 522 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 CCNG2Q16589 344 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 TRIM60Q495X7 471 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 TFDP3Q5H9I0 405 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 KAZNQ674X7 775 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 CRIPAKQ8N1N5 446 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 ZMIZ2Q8NF64 920 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 OR10T2Q8NGX3 314 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 MYLPFQ96A32 169 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 ZNF333Q96JL9 665 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 CASD1Q96PB1 797 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 DPH5Q9H2P9 285 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 FAM114A2Q9NRY5 505 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 TMEM30AQ9NV96 361 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 DNAJB4Q9UDY4 337 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 RASAL2Q9UJF2 1139 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 PCDHB7Q9Y5E2 793 aa18.37■□□□□ 0.53
SSBP3-203ENST00000371319 ARHGEF37A1IGU5 675 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 SDC4P31431 198 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 GATMP50440 423 aa18.36■□□□□ 0.53
SSBP3-203ENST00000371319 ARSEP51690 589 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms