RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ITIH3Q06033 890 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 ELAVL2Q12926 359 aaKnown RBP20.41■□□□□ 0.86
CHTOP-204ENST00000368694 LONRF2Q1L5Z9 754 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 SLC39A12Q504Y0 691 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 SPATA2LQ8IUW3 424 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-204ENST00000368694 RXFP2Q8WXD0 754 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 NAP1L3Q99457 506 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-204ENST00000368694 IL23AQ9NPF7 189 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 COL4A6Q14031 1691 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 C2CD4BA6NLJ0 364 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 RNF8O76064 485 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 RHOXF2BP0C7M4 288 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 TCF4P15884 667 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 ZNF143P52747 638 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-204ENST00000368694 CTXN3Q4LDR2 81 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 C4orf50Q6ZRC1 276 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 KCTD13Q8WZ19 329 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 RHOXF2Q9BQY4 288 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 AP1M1Q9BXS5 423 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 EPC1Q9H2F5 836 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 TMEM30AQ9NV96 361 aa20.41■□□□□ 0.86
CHTOP-204ENST00000368694 TTC7AQ9ULT0 858 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-204ENST00000368694 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
CHTOP-204ENST00000368694 CDO1Q16878 200 aa20.4■□□□□ 0.86
CHTOP-204ENST00000368694 ZNF280DQ6N043 979 aa20.4■□□□□ 0.86
CHTOP-204ENST00000368694 ADAT2Q7Z6V5 191 aaKnown RBP20.4■□□□□ 0.86
CHTOP-204ENST00000368694 DCP1BQ8IZD4 617 aaKnown RBP20.4■□□□□ 0.86
CHTOP-204ENST00000368694 ZMIZ2Q8NF64 920 aa20.4■□□□□ 0.86
CHTOP-204ENST00000368694 CWH43Q9H720 699 aa20.4■□□□□ 0.86
CHTOP-204ENST00000368694 ASNSD1Q9NWL6 643 aa20.4■□□□□ 0.86
CHTOP-204ENST00000368694 ZBBXA8MT70 800 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 KRIT1O00522 736 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 LRCH4O75427 683 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 DESP17661 470 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 FGFR3P22607 806 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 TKTL1P51854 596 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 CLUL1Q15846 466 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 ODF2Q5BJF6 829 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 TRNP1Q6NT89 227 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 SLC26A9Q7LBE3 791 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 CCDC50Q8IVM0 306 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 BCL7CQ8WUZ0 217 aaPredicted RBP20.39■□□□□ 0.86
CHTOP-204ENST00000368694 FAM149B1Q96BN6 582 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 CNPY3Q9BT09 278 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 ZCWPW1Q9H0M4 648 aa20.39■□□□□ 0.86
CHTOP-204ENST00000368694 DMAP1Q9NPF5 467 aaPredicted RBP20.39■□□□□ 0.86
CHTOP-204ENST00000368694 PTPRSQ13332 1948 aa20.39■□□□□ 0.85
CHTOP-204ENST00000368694 SDC4P31431 198 aa20.39■□□□□ 0.85
CHTOP-204ENST00000368694 GABPB1Q06547 395 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 SMC1AQ14683 1233 aaKnown RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 ACAP1Q15027 740 aa20.39■□□□□ 0.85
CHTOP-204ENST00000368694 HADHQ16836 314 aaKnown RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 C15orf59Q2T9L4 293 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 GPR161Q8N6U8 529 aaKnown RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 ZNF689Q96CS4 500 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 CSNK1G1Q9HCP0 422 aa20.39■□□□□ 0.85
CHTOP-204ENST00000368694 KLHL11Q9NVR0 708 aa20.39■□□□□ 0.85
CHTOP-204ENST00000368694 ABI2Q9NYB9 513 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-204ENST00000368694 SCNN1AP37088 669 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 NDUFV1P49821 464 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 ATP11AP98196 1134 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 PPIGQ13427 754 aaKnown RBP eCLIP20.38■□□□□ 0.854e-9■□□□□ 9.6
CHTOP-204ENST00000368694 BTG3Q14201 252 aaPredicted RBP20.38■□□□□ 0.85
CHTOP-204ENST00000368694 LLGL1Q15334 1064 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 EFHC1Q5JVL4 640 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 CCDC70Q6NSX1 233 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 GPRIN1Q7Z2K8 1008 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 NDRG1Q92597 394 aaKnown RBP20.38■□□□□ 0.85
CHTOP-204ENST00000368694 BADQ92934 168 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 KHSRPQ92945 711 aaKnown RBP eCLIP20.38■□□□□ 0.851e-9■□□□□ 11.3
CHTOP-204ENST00000368694 MRPS5P82675 430 aaKnown RBP20.38■□□□□ 0.85
CHTOP-204ENST00000368694 RTP2Q5QGT7 225 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 KATNAL2Q8IYT4 538 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 C7orf61Q8IZ16 206 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 MMGT1Q8N4V1 131 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 YME1L1Q96TA2 773 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 TTPALQ9BTX7 342 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 ULBP1Q9BZM6 244 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 ZWILCHQ9H900 591 aa20.38■□□□□ 0.85
CHTOP-204ENST00000368694 PATJQ8NI35 1801 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 GOLGA6L10A0A0M3HER8 536 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 ZRANB2O95218 330 aaKnown RBP eCLIP20.37■□□□□ 0.852e-14■■■□□ 18.7
CHTOP-204ENST00000368694 CYP2F1P24903 491 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 GRIK1P39086 918 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 ARPP19P56211 112 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 FPGSQ05932 587 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 ADCY1Q08828 1119 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 MRPL58Q14197 206 aaKnown RBP20.37■□□□□ 0.85
CHTOP-204ENST00000368694 SMTNL2Q2TAL5 461 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 ATP13A4Q4VNC1 1196 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 SH3PXD2AQ5TCZ1 1133 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 LRRC38Q5VT99 294 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 KCNT2Q6UVM3 1135 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 ARFGAP1Q8N6T3 406 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 PCSK1NQ9UHG2 260 aa20.37■□□□□ 0.85
CHTOP-204ENST00000368694 OR6C75A6NL08 312 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 HSF2BPO75031 334 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 FBXO21O94952 628 aa20.36■□□□□ 0.85
CHTOP-204ENST00000368694 KRT1P04264 644 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms