RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 RGL1Q9NZL6 768 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 EIF2B4Q9UI10 523 aaKnown RBP11.2□□□□□ -0.62
TUBE1-201ENST00000368657 ANKRD6Q9Y2G4 727 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
TUBE1-201ENST00000368657 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
TUBE1-201ENST00000368657 CYP17A1P05093 508 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 CSH1P0DML2 217 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 CSH2P0DML3 217 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 HAPLN1P10915 354 aaPredicted RBP11.19□□□□□ -0.62
TUBE1-201ENST00000368657 TNFSF9P41273 254 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 PDE6CP51160 858 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 MESP2Q0VG99 397 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 DNAJC3Q13217 504 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 INF2Q27J81 1249 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 SGO2Q562F6 1265 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 TTC22Q5TAA0 569 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 ATF7IP2Q5U623 682 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 HIST2H2BCQ6DN03 193 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 DSTYKQ6XUX3 929 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 TPH2Q8IWU9 490 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 SPPL2BQ8TCT7 592 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 LRRC15Q8TF66 581 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
TUBE1-201ENST00000368657 DYDC2Q96IM9 177 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 MRGPRX1Q96LB2 322 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 CCDC43Q96MW1 224 aaKnown RBP11.19□□□□□ -0.62
TUBE1-201ENST00000368657 IL25Q9H293 177 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 CD248Q9HCU0 757 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 TRPC7Q9HCX4 862 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 ITM2CQ9NQX7 267 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 CNTN3Q9P232 1028 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 VAV3Q9UKW4 847 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 STARD13Q9Y3M8 1113 aa11.19□□□□□ -0.62
TUBE1-201ENST00000368657 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.19□□□□□ -0.62
TUBE1-201ENST00000368657 KNL1Q8NG31 2342 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 H0Y8X5 98 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 LAD1O00515 517 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 SLITRK3O94933 977 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 LYPLA2O95372 231 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 TDP2O95551 362 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 ITGB2P05107 769 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 GSPT1P15170 499 aaKnown RBP11.18□□□□□ -0.62
TUBE1-201ENST00000368657 HDCP19113 662 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 ATP2B1P20020 1258 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 GRIA4P48058 902 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 LSSP48449 732 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
TUBE1-201ENST00000368657 E2F1Q01094 437 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 CTTNQ14247 550 aaKnown RBP11.18□□□□□ -0.62
TUBE1-201ENST00000368657 E2F4Q16254 413 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 SLC39A12Q504Y0 691 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
TUBE1-201ENST00000368657 SLC22A12Q96S37 553 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 CCDC113Q9H0I3 377 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 PCED1AQ9H1Q7 454 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 THSD1Q9NS62 852 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 ADAMTS1Q9UHI8 967 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 DDX25Q9UHL0 483 aaKnown RBP11.18□□□□□ -0.62
TUBE1-201ENST00000368657 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 MAGED2Q9UNF1 606 aaPredicted RBP11.18□□□□□ -0.62
TUBE1-201ENST00000368657 TNFSF13BQ9Y275 285 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 USP20Q9Y2K6 914 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 ANK1P16157 1881 aa11.18□□□□□ -0.62
TUBE1-201ENST00000368657 BSNQ9UPA5 3926 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 KCNK3O14649 394 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 ZBTB43O43298 467 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 ADH1CP00326 375 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
TUBE1-201ENST00000368657 LIG1P18858 919 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 PAX3P23760 479 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 EFNA5P52803 228 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 ASIC1P78348 528 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 KDSRQ06136 332 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 RHBDF2Q6PJF5 856 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 PHTF2Q8N3S3 785 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
TUBE1-201ENST00000368657 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 MCPH1Q8NEM0 835 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 CCDC148Q8NFR7 591 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 NUP58Q9BVL2 599 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
TUBE1-201ENST00000368657 LRBAP50851 2863 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 POLQO75417 2590 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 A0A1B0GTQ1 180 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 BTBD18B2RXH4 712 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 PPFIA2O75334 1257 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 MT-CO3P00414 261 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 ITGAVP06756 1048 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 PFKLP17858 780 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 WASP42768 502 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 RARRES1P49788 294 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 OSTNP61366 133 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 ORC1Q13415 861 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 KCNB1Q14721 858 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 NT5DC1Q5TFE4 455 aa11.16□□□□□ -0.62
TUBE1-201ENST00000368657 KIAA1324Q6UXG2 1013 aaKnown RBP11.16□□□□□ -0.62
TUBE1-201ENST00000368657 FILIP1Q7Z7B0 1213 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms