RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 A0A1W2PRU2 124 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 TNFRSF10BO14763 440 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 ABL1P00519 1130 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 TNFAIP3P21580 790 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 FSHRP23945 695 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 YWHAQP27348 245 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 GABRR2P28476 465 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 GPD2P43304 727 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 KCNQ1P51787 676 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 CDR2Q01850 454 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 TAF10Q12962 218 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 TBX2Q13207 712 aaPredicted RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 CBX2Q14781 532 aaPredicted RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 SLC5A9Q2M3M2 681 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 TDRD12Q587J7 1177 aaKnown RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 PTCRAQ6ISU1 281 aaPredicted RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 PMF1Q6P1K2 205 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 CYP26C1Q6V0L0 522 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 GET4Q7L5D6 327 aaPredicted RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 TMC8Q8IU68 726 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 WDTC1Q8N5D0 677 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 C1orf131Q8NDD1 294 aaKnown RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 ITFG1Q8TB96 612 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 NDRG1Q92597 394 aaKnown RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 FBXO32Q969P5 355 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 AGPAT1Q99943 283 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 LRRC3Q9BY71 257 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 NUCKS1Q9H1E3 243 aaKnown RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 ATXN3LQ9H3M9 355 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 HAUS4Q9H6D7 363 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 WDR6Q9NNW5 1121 aaKnown RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 CHORDC1Q9UHD1 332 aaPredicted RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 CYTH4Q9UIA0 394 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 MRPS23Q9Y3D9 190 aaKnown RBP14.66□□□□□ -0.06
TPM3-211ENST00000368531 CEP83Q9Y592 693 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 CLUHO75153 1309 aa14.66□□□□□ -0.06
TPM3-211ENST00000368531 TCF20Q9UGU0 1960 aaKnown RBP14.65□□□□□ -0.06
TPM3-211ENST00000368531 REV3LO60673 3130 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 ANAPC1Q9H1A4 1944 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 AKR1B15C9JRZ8 316 aaPredicted RBP14.65□□□□□ -0.06
TPM3-211ENST00000368531 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
TPM3-211ENST00000368531 MFAP3LO75121 409 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 RTN3O95197 1032 aaPredicted RBP14.65□□□□□ -0.06
TPM3-211ENST00000368531 POU2F2P09086 479 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 CCR2P41597 374 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 PLA2G4AP47712 749 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 TKTL1P51854 596 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 FMO1Q01740 532 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 ADIGQ0VDE8 80 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 TSR1Q2NL82 804 aaKnown RBP14.65□□□□□ -0.06
TPM3-211ENST00000368531 NAA35Q5VZE5 725 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 FMNL3Q8IVF7 1028 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 TMEM35BQ8NCS4 154 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 OR8K1Q8NGG5 319 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 CPA5Q8WXQ8 436 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 SUSD6Q92537 303 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 PCDHB18PQ96TA0 734 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 ULBP1Q9BZM6 244 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 MIS12Q9H081 205 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 LHX5Q9H2C1 402 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 UXTQ9UBK9 157 aaPredicted RBP14.65□□□□□ -0.06
TPM3-211ENST00000368531 DENND4AQ7Z401 1863 aa14.65□□□□□ -0.06
TPM3-211ENST00000368531 BRWD1Q9NSI6 2320 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 ZNF197O14709 1029 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 GABBR2O75899 941 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 PAPLNO95428 1278 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 F11P03951 625 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 PLEKP08567 350 aaPredicted RBP14.64□□□□□ -0.07
TPM3-211ENST00000368531 IL9P15248 144 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 CEBPBP17676 345 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 KIF11P52732 1056 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 CYP4F8P98187 520 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 GSE1Q14687 1217 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 TEAD2Q15562 447 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 GAREM2Q75VX8 874 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 ZNF571Q7Z3V5 609 aaPredicted RBP14.64□□□□□ -0.07
TPM3-211ENST00000368531 ZNF677Q86XU0 584 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 SIX6OS1Q8N1H7 587 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 SHKBP1Q8TBC3 707 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 SYN2Q92777 582 aaPredicted RBP14.64□□□□□ -0.07
TPM3-211ENST00000368531 MYRFLQ96LU7 910 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 CEP295NLQ96MC4 621 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 NECTIN4Q96NY8 510 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 SLITRK1Q96PX8 696 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 GCNAQ96QF7 691 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 UBXN6Q9BZV1 441 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 FBXO44Q9H4M3 255 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 IL21Q9HBE4 155 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 PNPLA8Q9NP80 782 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 ZNHIT6Q9NWK9 470 aaKnown RBP14.64□□□□□ -0.07
TPM3-211ENST00000368531 EHD2Q9NZN4 543 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 GMIPQ9P107 970 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 TJP2Q9UDY2 1190 aa14.64□□□□□ -0.07
TPM3-211ENST00000368531 TMCO5BA8MYB1 307 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 E5RJQ4 531 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 MOSPD3O75425 235 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 SERPING1P05155 500 aa14.63□□□□□ -0.07
TPM3-211ENST00000368531 CDC25BP30305 580 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms