RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 FAM13BQ9NYF5 915 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 MYOFQ9NZM1 2061 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 A8MXQ7 604 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 K7EQS6 105 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 F13A1P00488 732 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 CLDN10P78369 228 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 SF3A2Q15428 464 aaKnown RBP17.05■□□□□ 0.32
CKS1B-202ENST00000368436 PLK5Q496M5 336 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 PPM1JQ5JR12 505 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 FOXD4L5Q5VV16 416 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-202ENST00000368436 TDRD10Q5VZ19 366 aaKnown RBP17.05■□□□□ 0.32
CKS1B-202ENST00000368436 ATL3Q6DD88 541 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 USP33Q8TEY7 942 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 TMEM174Q8WUU8 243 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 FOXD4L4Q8WXT5 416 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-202ENST00000368436 CNTNAP3BQ96NU0 1288 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 CNTNAP3Q9BZ76 1288 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 DUSP15Q9H1R2 295 aaPredicted RBP17.05■□□□□ 0.32
CKS1B-202ENST00000368436 NXF1Q9UBU9 619 aaKnown RBP17.05■□□□□ 0.32
CKS1B-202ENST00000368436 CPQQ9Y646 472 aa17.05■□□□□ 0.32
CKS1B-202ENST00000368436 CLDN5O00501 218 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 SLC9A3R1O14745 358 aaPredicted RBP17.04■□□□□ 0.32
CKS1B-202ENST00000368436 TM4SF5O14894 197 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 EXOC3O60645 756 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 C4BPAP04003 597 aaKnown RBP17.04■□□□□ 0.32
CKS1B-202ENST00000368436 CYP17A1P05093 508 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 AFMP43652 599 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 CASP4P49662 377 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 AP3M2P53677 418 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 PSMD2Q13200 908 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 CCDC6Q16204 474 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 C12orf50Q8NA57 414 aaPredicted RBP17.04■□□□□ 0.32
CKS1B-202ENST00000368436 GOLGA5Q8TBA6 731 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 DDX1Q92499 740 aaKnown RBP17.04■□□□□ 0.32
CKS1B-202ENST00000368436 SLITRK1Q96PX8 696 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 DMAC2Q9NW81 257 aa17.04■□□□□ 0.32
CKS1B-202ENST00000368436 NUP205Q92621 2012 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 KLRC4O43908 158 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 PHACTR2O75167 634 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 RTN3O95197 1032 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-202ENST00000368436 ABL1P00519 1130 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 YWHAQP27348 245 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 ME1P48163 572 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 DHCR24Q15392 516 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 FOXD4L6Q3SYB3 417 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-202ENST00000368436 AASDHQ4L235 1098 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-202ENST00000368436 FOXD4L3Q6VB84 417 aaPredicted RBP17.03■□□□□ 0.32
CKS1B-202ENST00000368436 PAQR9Q6ZVX9 377 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 SLC9A9Q8IVB4 645 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 OVCA2Q8WZ82 227 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 RXFP3Q9NSD7 469 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 IL37Q9NZH6 218 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 RCOR1Q9UKL0 485 aa17.03■□□□□ 0.32
CKS1B-202ENST00000368436 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.32
CKS1B-202ENST00000368436 RHOBTB1O94844 696 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 SLFN14P0C7P3 912 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 MPLP40238 635 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 EIF2DP41214 584 aaKnown RBP17.02■□□□□ 0.32
CKS1B-202ENST00000368436 CDH8P55286 799 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 MRPS21P82921 87 aaKnown RBP17.02■□□□□ 0.32
CKS1B-202ENST00000368436 STK4Q13043 487 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 SNX30Q5VWJ9 437 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 RHBDF2Q6PJF5 856 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 RASSF3Q86WH2 238 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 DDX42Q86XP3 938 aaKnown RBP eCLIP17.02■□□□□ 0.32
CKS1B-202ENST00000368436 GRAMD1CQ8IYS0 662 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 PDZD8Q8NEN9 1154 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 SMYD3Q9H7B4 428 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 VPS45Q9NRW7 570 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 SMPD4Q9NXE4 827 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 CFAP97Q9P2B7 532 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 CFAP45Q9UL16 551 aa17.02■□□□□ 0.32
CKS1B-202ENST00000368436 MYH10P35580 1976 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 THADAQ6YHU6 1953 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 A0A0A0MRY4 1105 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ANTXRLA6NF34 631 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 TNFRSF10BO14763 440 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 DCLK1O15075 740 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
CKS1B-202ENST00000368436 VNN1O95497 513 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
CKS1B-202ENST00000368436 CHRM1P11229 460 aaPredicted RBP17.01■□□□□ 0.31
CKS1B-202ENST00000368436 SLC6A11P48066 632 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 DGKEP52429 567 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 BIRC3Q13489 604 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 NCOA4Q13772 614 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ELF2Q15723 593 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ZNF699Q32M78 642 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 C2orf27AQ580R0 203 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 ZNF667Q5HYK9 610 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 IL31Q6EBC2 164 aa17.01■□□□□ 0.31
CKS1B-202ENST00000368436 FAM35AQ86V20 835 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms