RNA–Protein interactions for RNA: ENST00000368202.4

PTPRK-201, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 526 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-201ENST00000368202 MESDQ14696 234 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 TCEAL1Q15170 157 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 TPGS2Q68CL5 300 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 PLEKHA7Q6IQ23 1121 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 NYAP1Q6ZVC0 841 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 TMEM110Q86TL2 294 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 TDHQ8IZJ6 230 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 AUTS2Q8WXX7 1259 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 KCNK16Q96T55 309 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 TCF25Q9BQ70 676 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 SLC28A3Q9HAS3 691 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 TLR9Q9NR96 1032 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 IP6K2Q9UHH9 426 aa12.82□□□□□ -0.36
PTPRK-201ENST00000368202 WDR27A2RRH5 827 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 CTAGE9A4FU28 777 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 PRRG1O14668 218 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 PALMO75781 387 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 HAPLN1P10915 354 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 ALDH1A3P47895 512 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 RNASE9P60153 205 aaKnown RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 SLC6A3Q01959 620 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 GPM6BQ13491 265 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 MAMLD1Q13495 774 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 TAF12Q16514 161 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 PLPP4Q5VZY2 271 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 FAM109BQ6ICB4 259 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 PDE12Q6L8Q7 609 aaKnown RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 SCUBE3Q8IX30 993 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 ATAD1Q8NBU5 361 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 TPCN2Q8NHX9 752 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 C8orf48Q96LL4 319 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 MCEEQ96PE7 176 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 CLSTN3Q9BQT9 956 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 TRIM62Q9BVG3 475 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 NKX2-4Q9H2Z4 354 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 FBXO44Q9H4M3 255 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 CNGB3Q9NQW8 809 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 EHD2Q9NZN4 543 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 TJP2Q9UDY2 1190 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 AFF4Q9UHB7 1163 aaKnown RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 CHORDC1Q9UHD1 332 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-201ENST00000368202 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 AMFRQ9UKV5 643 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 MAFFQ9ULX9 164 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 CAPN6Q9Y6Q1 641 aa12.81□□□□□ -0.36
PTPRK-201ENST00000368202 SPOPO43791 374 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 MTA2O94776 668 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 RTN3O95197 1032 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-201ENST00000368202 ATF2P15336 505 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 KLRC2P26717 231 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 SCNN1AP37088 669 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 SSR1P43307 286 aaKnown RBP12.8□□□□□ -0.36
PTPRK-201ENST00000368202 ERVK-21P61565 698 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 DUSP4Q13115 394 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 RAB33AQ14088 237 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 LLGL2Q6P1M3 1020 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 NUP93Q8N1F7 819 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 ZMIZ2Q8NF64 920 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 NAPGQ99747 312 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-201ENST00000368202 PBX4Q9BYU1 374 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 ULBP1Q9BZM6 244 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 CYP4F11Q9HBI6 524 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 HSFX1Q9UBD0 423 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 COG5Q9UP83 839 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 YBX2Q9Y2T7 364 aaKnown RBP12.8□□□□□ -0.36
PTPRK-201ENST00000368202 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
PTPRK-201ENST00000368202 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 CAPN9O14815 690 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 ADAM12O43184 909 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 PAPSS1O43252 624 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-201ENST00000368202 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-201ENST00000368202 HSF2BPO75031 334 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 RNF8O76064 485 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 ZBED1O96006 694 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 GPD1P21695 349 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 PSMA2P25787 234 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 PBX2P40425 430 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 SLC1A1P43005 524 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 RPL34P49207 117 aaKnown RBP12.79□□□□□ -0.36
PTPRK-201ENST00000368202 SLC5A3P53794 718 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 CACNA2D1P54289 1103 aa12.79□□□□□ -0.36
PTPRK-201ENST00000368202 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms