RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 COPAP53621 1224 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 UGCGQ16739 394 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 DCAF4L1Q3SXM0 396 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ATP13A4Q4VNC1 1196 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ZNF484Q5JVG2 852 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ZPBP2Q6X784 338 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 LRRC57Q8N9N7 239 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 PWWP2AQ96N64 755 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 PCDHB18PQ96TA0 734 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 FDXACB1Q9BRP7 624 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 ARHGEF38Q9NXL2 777 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 GGA2Q9UJY4 613 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ATP9AO75110 1047 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 MCF2P10911 925 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ALDH5A1P51649 535 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 ELF3P78545 371 aaPredicted RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 CNTN2Q02246 1040 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 RASA2Q15283 850 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 VSIG10LQ86VR7 867 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 IPMKQ8NFU5 416 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 SPON2Q9BUD6 331 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 KIF9Q9HAQ2 790 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 EML4Q9HC35 981 aaKnown RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 UBQLN1Q9UMX0 589 aaKnown RBP12.13□□□□□ -0.47
COPA-202ENST00000368069 AP4E1Q9UPM8 1137 aa12.13□□□□□ -0.47
COPA-202ENST00000368069 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 PSMD3O43242 534 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 DGKIO75912 1065 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 NCAM1P13591 858 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 CALB2P22676 271 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 TMED1Q13445 227 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 FKBP1CQ5VVH2 108 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 FAM131BQ86XD5 332 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 MRPL46Q9H2W6 279 aaKnown RBP12.12□□□□□ -0.47
COPA-202ENST00000368069 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 SDR42E2A6NKP2 422 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 BNIP3LO60238 219 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 PHEXP78562 749 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
COPA-202ENST00000368069 TBCCQ15814 346 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 ZBTB18Q99592 522 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 DCLRE1BQ9H816 532 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 SAE1Q9UBE0 346 aaPredicted RBP12.12□□□□□ -0.47
COPA-202ENST00000368069 FAM200BP0CF97 657 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 TGM2P21980 687 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 ADRA1DP25100 572 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 GRIK1P39086 918 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 ZNF235Q14590 738 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 TDRD10Q5VZ19 366 aaKnown RBP12.12□□□□□ -0.47
COPA-202ENST00000368069 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 TRAPPC12Q8WVT3 735 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 SLITRK1Q96PX8 696 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
COPA-202ENST00000368069 FSCN2O14926 492 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 ATICP31939 592 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 NDST1P52848 882 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 PCSK7Q16549 785 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 GPRC5AQ8NFJ5 357 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 CDC26Q8NHZ8 85 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 GIPC2Q8TF65 315 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
COPA-202ENST00000368069 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 PORCNQ9H237 461 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 DNAJC16Q9Y2G8 782 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 SHOX2O60902 331 aaPredicted RBP12.11□□□□□ -0.47
COPA-202ENST00000368069 MICAL2O94851 1124 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 CBX6O95503 412 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 EIF4BP23588 611 aaKnown RBP12.11□□□□□ -0.47
COPA-202ENST00000368069 EPHB2P29323 1055 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 MIPP30301 263 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 OAZ1P54368 228 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 JAM2P57087 298 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 MTFR1Q15390 333 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 DGKDQ16760 1214 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 QPCTQ16769 361 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 EXOC3L1Q86VI1 746 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 SPATA2LQ8IUW3 424 aaPredicted RBP12.11□□□□□ -0.47
COPA-202ENST00000368069 ANKRD13AQ8IZ07 590 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 SEMA4DQ92854 862 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 GLRA2P23416 452 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 CYP2F1P24903 491 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 PNPLA4P41247 253 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 DYNC1I2Q13409 638 aaKnown RBP12.11□□□□□ -0.47
COPA-202ENST00000368069 CYTH1Q15438 398 aa12.11□□□□□ -0.47
COPA-202ENST00000368069 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms