RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PTPN4P29074 926 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 PCDHA3Q9Y5H8 950 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 POLRMTO00411 1230 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 ITGA9Q13797 1035 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLFN11Q7Z7L1 901 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 ATP6V0D2Q8N8Y2 350 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 NDEL1Q9GZM8 345 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 LATS2Q9NRM7 1088 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 ADCY3O60266 1144 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 RPS6KA5O75582 802 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 WASHC2DQ5SRD0 308 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 CACHD1Q5VU97 1274 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 DEFB129Q9H1M3 183 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 RPL26L1Q9UNX3 145 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZNF268Q14587 947 aaPredicted RBP12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 KYAT3Q6YP21 454 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 SLC9A9Q8IVB4 645 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 TADA1Q96BN2 335 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 SNTNA6NMZ2 147 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 DPYSL4O14531 572 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 ANXA11P50995 505 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 VAT1Q99536 393 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 METTL5Q9NRN9 209 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 TADA2AO75478 443 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 MYL4P12829 197 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 SCUBE1Q8IWY4 988 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 FBXO25Q8TCJ0 367 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 KLHL11Q9NVR0 708 aa12.46□□□□□ -0.42
CDC42BPA-203ENST00000366766 ZNF398Q8TD17 642 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 ASB2Q96Q27 587 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 FAM124BQ9H5Z6 455 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 GDF3Q9NR23 364 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 GON4LQ3T8J9 2241 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 NCAM1P13591 858 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 DNAJC3Q13217 504 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 TMA16Q96EY4 203 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 IDI2Q9BXS1 227 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 SCN3BQ9NY72 215 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 TAGLN3Q9UI15 199 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 KATNAL2Q8IYT4 538 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 BARX2Q9UMQ3 279 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 ENO3P13929 434 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 HOXB6P17509 224 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 KCNA1Q09470 495 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 TSPAN18Q96SJ8 248 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 KCNJ1P48048 391 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 RXRGP48443 463 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 RUNX1T1Q06455 604 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 THAP1Q9NVV9 213 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 H7C4K7 107 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 MPOP05164 745 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 RIN2Q8WYP3 895 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 PABPC5Q96DU9 382 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 PAFAH2Q99487 392 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 CCDC90BQ9GZT6 254 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 DUOX1Q9NRD9 1551 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 VPS4BO75351 444 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 EIF4BP23588 611 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 TCF7P36402 384 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 CDR2LQ86X02 465 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 PCYOX1Q9UHG3 505 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 CYP3A7P24462 503 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 SEC24CP53992 1094 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 MAP3K13O43283 966 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 HK2P52789 917 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 SMTNL2Q2TAL5 461 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 CLEC4FQ8N1N0 589 aa12.45□□□□□ -0.42
CDC42BPA-203ENST00000366766 PIK3C2AO00443 1686 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 EGFRP00533 1210 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 RAB27AP51159 221 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 GTF2A2P52657 109 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 DDX42Q86XP3 938 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 NEUROG2Q9H2A3 272 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 POLD4Q9HCU8 107 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 TRHDEQ9UKU6 1024 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 HMGCRP04035 888 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 LZTR1Q8N653 840 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 TMEM39BQ9GZU3 492 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 FAM192AQ9GZU8 254 aa12.44□□□□□ -0.42
CDC42BPA-203ENST00000366766 SIGLEC1Q9BZZ2 1709 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms