RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 GAS2L3Q86XJ1 694 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 SFTPA1Q8IWL2 248 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 LINC01465Q8N7H1 131 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 RBMXL3Q8N7X1 1067 aaKnown RBP2.56□□□□□ -2
RNU4-90P-201ENST00000362773 SMRP1Q8NCR6 262 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 ZNF548Q8NEK5 533 aaPredicted RBP2.56□□□□□ -2
RNU4-90P-201ENST00000362773 OSR1Q8TAX0 266 aaPredicted RBP2.56□□□□□ -2
RNU4-90P-201ENST00000362773 TMEM171Q8WVE6 324 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 CUL5Q93034 780 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 RSPRY1Q96DX4 576 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 MVB12AQ96EY5 273 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 MOGAT1Q96PD6 335 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 FYTTD1Q96QD9 318 aaKnown RBP2.56□□□□□ -2
RNU4-90P-201ENST00000362773 DPCDQ9BVM2 203 aaPredicted RBP2.56□□□□□ -2
RNU4-90P-201ENST00000362773 TMEM184CQ9NVA4 438 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 USP35Q9P2H5 1018 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 HEY2Q9UBP5 337 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 LPAR3Q9UBY5 353 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.56□□□□□ -2
RNU4-90P-201ENST00000362773 WASHC2CQ9Y4E1 1318 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 ZMYM2Q9UBW7 1377 aa2.56□□□□□ -2
RNU4-90P-201ENST00000362773 A0A087WWL8 130 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 GTPBP1O00178 669 aaKnown RBP2.55□□□□□ -2
RNU4-90P-201ENST00000362773 SMAD6O43541 496 aaKnown RBP2.55□□□□□ -2
RNU4-90P-201ENST00000362773 CNOT3O75175 753 aaKnown RBP2.55□□□□□ -2
RNU4-90P-201ENST00000362773 PMPCBO75439 489 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 GCATO75600 419 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 MT-CO3P00414 261 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 ATF7P17544 494 aaPredicted RBP2.55□□□□□ -2
RNU4-90P-201ENST00000362773 SCP2P22307 547 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 CCND1P24385 295 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 GKP32189 559 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 ZNF91Q05481 1191 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 LMAN2Q12907 356 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 ERV3-1Q14264 604 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 ACRBPQ8NEB7 543 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 CTHRC1Q96CG8 243 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 P2RX7Q99572 595 aaKnown RBP2.55□□□□□ -2
RNU4-90P-201ENST00000362773 SMAD5Q99717 465 aaKnown RBP2.55□□□□□ -2
RNU4-90P-201ENST00000362773 C17orf80Q9BSJ5 609 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 WWOXQ9NZC7 414 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 AMFRQ9UKV5 643 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 TMX2Q9Y320 296 aa2.55□□□□□ -2
RNU4-90P-201ENST00000362773 FAM90A8PA6NJQ4 464 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 ALG1L2C9J202 215 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CES2O00748 559 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 FAM90A13PP0C7W8 464 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 FAM90A24PP0C7X0 464 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 PSG1P11464 419 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CYP2C9P11712 490 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 DIO1P49895 249 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 ARFIP2P53365 341 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 KRT17Q04695 432 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 LARS2Q15031 903 aaKnown RBP2.54□□□□□ -2
RNU4-90P-201ENST00000362773 PTCHD3Q3KNS1 767 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 MGAT5BQ3V5L5 792 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CCDC157Q569K6 752 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 TMTC4Q5T4D3 741 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 PTCHD4Q6ZW05 846 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 LIX1LQ8IVB5 337 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 PELI3Q8N2H9 469 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 SLC15A4Q8N697 577 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 SIRT6Q8N6T7 355 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 DNAJC5GQ8N7S2 189 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 BPIFB1Q8TDL5 484 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 WIPF2Q8TF74 440 aaPredicted RBP2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CDK5RAP3Q96JB5 506 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 LYZL4Q96KX0 146 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CCDC17Q96LX7 622 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 PUS7Q96PZ0 661 aaKnown RBP2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CGRRF1Q99675 332 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 ARMT1Q9H993 441 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 SARS2Q9NP81 518 aaKnown RBP2.54□□□□□ -2
RNU4-90P-201ENST00000362773 ZBTB40Q9NUA8 1239 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 TRMT13Q9NUP7 481 aaKnown RBP2.54□□□□□ -2
RNU4-90P-201ENST00000362773 TFCP2L1Q9NZI6 479 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 CPA4Q9UI42 421 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 SPEF1Q9Y4P9 236 aa2.54□□□□□ -2
RNU4-90P-201ENST00000362773 TRIP12Q14669 1992 aaPredicted RBP2.53□□□□□ -2
RNU4-90P-201ENST00000362773 SPRY2O43597 315 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 SNUPNO95149 360 aaKnown RBP2.53□□□□□ -2
RNU4-90P-201ENST00000362773 IL33O95760 270 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 CRYABP02511 175 aaKnown RBP2.53□□□□□ -2
RNU4-90P-201ENST00000362773 THP07101 528 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 FGF2P09038 288 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 CTSAP10619 480 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 NPR1P16066 1061 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 TNFRSF1BP20333 461 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 RAB1AP62820 205 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 ID2Q02363 134 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 SEMA3AQ14563 771 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 MLC1Q15049 377 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 UBAP2Q5T6F2 1119 aaKnown RBP2.53□□□□□ -2
RNU4-90P-201ENST00000362773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.53□□□□□ -2
RNU4-90P-201ENST00000362773 KRT78Q8N1N4 520 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 MAFAQ8NHW3 353 aaPredicted RBP2.53□□□□□ -2
RNU4-90P-201ENST00000362773 HPS3Q969F9 1004 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 HSPBAP1Q96EW2 488 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 TRIM54Q9BYV2 358 aa2.53□□□□□ -2
RNU4-90P-201ENST00000362773 DPH1Q9BZG8 443 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms