RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ITGAVP06756 1048 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 RBP3P10745 1247 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 PTPN4P29074 926 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 EIF3EP60228 445 aaKnown RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 HSF5Q4G112 596 aaPredicted RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 PPM1NQ8N819 430 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 KCTD6Q8NC69 237 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.641e-7■■■■□ 25.5
SMC3-201ENST00000361804 PRPF31Q8WWY3 499 aaKnown RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 LPAR1Q92633 364 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 PORCNQ9H237 461 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ZNF302Q9NR11 478 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SHOC2Q9UQ13 582 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 C2CD2LO14523 706 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 HAUS5O94927 633 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 MT-ND3P03897 115 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SUPT20HL2P0C7V6 817 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 KDELR1P24390 212 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 RFC5P40937 340 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 MUM1Q2TAK8 710 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SUPT20HL1Q3ZLR7 823 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 RNF220Q5VTB9 566 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 FYB2Q5VWT5 728 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 CDCA2Q69YH5 1023 aaPredicted RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 ADGRD1Q6QNK2 874 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 TREML1Q86YW5 311 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 PPIL6Q8IXY8 311 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 KBTBD2Q8IY47 623 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 UNC5BQ8IZJ1 945 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ATP11CQ8NB49 1132 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SPATA18Q8TC71 538 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 NKD2Q969F2 451 aaPredicted RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 C20orf27Q9GZN8 174 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SYNCQ9H7C4 482 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 TAS2R1Q9NYW7 299 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ZFATQ9P243 1243 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ADGRA2Q96PE1 1338 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 MEI4A8MW99 385 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 CAPN9O14815 690 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 TBX10O75333 385 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ATG7O95352 703 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ENO1P06733 434 aaKnown RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 ARFIP2P53365 341 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 LMNB2Q03252 620 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 KDSRQ06136 332 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 CCDC6Q16204 474 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 TRIM72Q6ZMU5 477 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 TMEM35BQ8NCS4 154 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 KCNN1Q92952 543 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 MMP19Q99542 508 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SHCBP1LQ9BZQ2 653 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 SDCBP2Q9H190 292 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 GYG2O15488 501 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 GSC2O15499 205 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 MIPP30301 263 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 XKR3Q5GH77 459 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 ANGEL2Q5VTE6 544 aaKnown RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 TRNP1Q6NT89 227 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 NSUN6Q8TEA1 469 aaKnown RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 SLC7A3Q8WY07 619 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 USP1O94782 785 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SORBS2O94875 1100 aaKnown RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 OATP04181 439 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SLC45A4Q5BKX6 768 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 TMEM154Q6P9G4 183 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 UBR7Q8N806 425 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 INPP5DQ92835 1189 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 PTCD3Q96EY7 689 aaKnown RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 VCPIP1Q96JH7 1222 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SMYD3Q9H7B4 428 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 C17orf75Q9HAS0 396 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SMYD2Q9NRG4 433 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 H3BRJ5 948 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMC3-201ENST00000361804 ASPAP45381 313 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 THOC5Q13769 683 aaKnown RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 ZNF699Q32M78 642 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SNX30Q5VWJ9 437 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 ISLR2Q6UXK2 745 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 RGS9BPQ6ZS82 235 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SPDYE1Q8NFV5 336 aaPredicted RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 ARHGEF4Q9NR80 690 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 IL1RAPL1Q9NZN1 696 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 SLC24A2Q9UI40 661 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 DRG1Q9Y295 367 aaKnown RBP11.05□□□□□ -0.64
SMC3-201ENST00000361804 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
SMC3-201ENST00000361804 NFASCO94856 1347 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms