RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LONP2Q86WA8 852 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SENP2Q9HC62 589 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 NPHS2Q9NP85 383 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 NMRK2Q9NPI5 230 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 STK39Q9UEW8 545 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ZC3H11AO75152 810 aaKnown RBP eCLIP10.01□□□□□ -0.813e-6■■■■□ 25.7
CUX1-203ENST00000360264 URODP06132 367 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 TGM2P21980 687 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 RRN3Q9NYV6 651 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SPATA31A3Q5VYP0 1347 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 DSG1Q02413 1049 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SYCP2LQ5T4T6 812 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 PCSK9Q8NBP7 692 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 FBXO32Q969P5 355 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 A0A087WZ62 844 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 TALDO1P37837 337 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 LHX1P48742 406 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 KLC1Q07866 573 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MOXD1Q6UVY6 613 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 RASGRP2Q7LDG7 609 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 HLA-DRAP01903 254 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 NR3C2P08235 984 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ZNF24P17028 368 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 MAGEA4P43358 317 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 BRINP3Q76B58 766 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ARRDC4Q8NCT1 418 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 F5P12259 2224 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 CRB1P82279 1406 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 SF3B1O75533 1304 aaKnown RBP eCLIP10.01□□□□□ -0.814e-6■■■■■ 58.5
CUX1-203ENST00000360264 MAGEB16A2A368 324 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 NAA20P61599 178 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 UBE3AQ05086 875 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 TRIM28Q13263 835 aaKnown RBP10.01□□□□□ -0.81
CUX1-203ENST00000360264 TAB1Q15750 504 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 TFDP3Q5H9I0 405 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 ZNF280DQ6N043 979 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 KCNV2Q8TDN2 545 aa10.01□□□□□ -0.81
CUX1-203ENST00000360264 POLRMTO00411 1230 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 ADRM1Q16186 407 aa10□□□□□ -0.81
CUX1-203ENST00000360264 AHCYL2Q96HN2 611 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 ZNF518BQ9C0D4 1074 aa10□□□□□ -0.81
CUX1-203ENST00000360264 GANQ9H2C0 597 aa10□□□□□ -0.81
CUX1-203ENST00000360264 KLHL31Q9H511 634 aa10□□□□□ -0.81
CUX1-203ENST00000360264 LRRC40Q9H9A6 602 aa10□□□□□ -0.81
CUX1-203ENST00000360264 NCKIPSDQ9NZQ3 722 aa10□□□□□ -0.81
CUX1-203ENST00000360264 H3BMM5 538 aa10□□□□□ -0.81
CUX1-203ENST00000360264 PABPC1P11940 636 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 CCDC103Q8IW40 242 aa10□□□□□ -0.81
CUX1-203ENST00000360264 CENPLQ8N0S6 344 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 VPS33AQ96AX1 596 aa10□□□□□ -0.81
CUX1-203ENST00000360264 MXRA8Q9BRK3 442 aa10□□□□□ -0.81
CUX1-203ENST00000360264 MYOZ2Q9NPC6 264 aa10□□□□□ -0.81
CUX1-203ENST00000360264 CHST12Q9NRB3 414 aa10□□□□□ -0.81
CUX1-203ENST00000360264 RGS18Q9NS28 235 aa10□□□□□ -0.81
CUX1-203ENST00000360264 JCADQ9P266 1359 aa10□□□□□ -0.81
CUX1-203ENST00000360264 GSG1L2A8MUP6 293 aa10□□□□□ -0.81
CUX1-203ENST00000360264 PRKAA2P54646 552 aa10□□□□□ -0.81
CUX1-203ENST00000360264 ATAD3BQ5T9A4 648 aa10□□□□□ -0.81
CUX1-203ENST00000360264 TRMT2AQ8IZ69 625 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 UBA2Q9UBT2 640 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 DAGLAQ9Y4D2 1042 aa10□□□□□ -0.81
CUX1-203ENST00000360264 CELF2O95319 508 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 NPTXRO95502 500 aa10□□□□□ -0.81
CUX1-203ENST00000360264 FAM45BPQ6NSW5 357 aa10□□□□□ -0.81
CUX1-203ENST00000360264 KCTD14Q9BQ13 255 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 ZMYND8Q9ULU4 1186 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 GSTM1P09488 218 aa10□□□□□ -0.81
CUX1-203ENST00000360264 WEE2P0C1S8 567 aa10□□□□□ -0.81
CUX1-203ENST00000360264 NEK10Q6ZWH5 1172 aa10□□□□□ -0.81
CUX1-203ENST00000360264 ENGASEQ8NFI3 743 aa10□□□□□ -0.81
CUX1-203ENST00000360264 REEP2Q9BRK0 252 aa10□□□□□ -0.81
CUX1-203ENST00000360264 CLPBQ9H078 707 aa10□□□□□ -0.81
CUX1-203ENST00000360264 VGLL3A8MV65 326 aa10□□□□□ -0.81
CUX1-203ENST00000360264 DTNBO60941 627 aa10□□□□□ -0.81
CUX1-203ENST00000360264 ITGA1P56199 1179 aa10□□□□□ -0.81
CUX1-203ENST00000360264 GNA13Q14344 377 aa10□□□□□ -0.81
CUX1-203ENST00000360264 TERF2Q15554 542 aa10□□□□□ -0.81
CUX1-203ENST00000360264 FAM98BQ52LJ0 330 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 PHACTR4Q8IZ21 702 aa10□□□□□ -0.81
CUX1-203ENST00000360264 FMR1NBQ8N0W7 255 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 ZNF557Q8N988 423 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 CPA5Q8WXQ8 436 aa10□□□□□ -0.81
CUX1-203ENST00000360264 SERAC1Q96JX3 654 aa10□□□□□ -0.81
CUX1-203ENST00000360264 YME1L1Q96TA2 773 aa10□□□□□ -0.81
CUX1-203ENST00000360264 NFKBIZQ9BYH8 718 aa10□□□□□ -0.81
CUX1-203ENST00000360264 ESYT3A0FGR9 886 aa10□□□□□ -0.81
CUX1-203ENST00000360264 ALDH6A1Q02252 535 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 BAATQ14032 418 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 TSNQ15631 228 aaKnown RBP10□□□□□ -0.81
CUX1-203ENST00000360264 JAMLQ86YT9 394 aa10□□□□□ -0.81
CUX1-203ENST00000360264 NUP214P35658 2090 aaPredicted RBP10□□□□□ -0.81
CUX1-203ENST00000360264 PRAMEF22A3QJZ6 481 aa10□□□□□ -0.81
CUX1-203ENST00000360264 S100GP29377 79 aa10□□□□□ -0.81
CUX1-203ENST00000360264 PTPN7P35236 360 aa10□□□□□ -0.81
CUX1-203ENST00000360264 FEZF2Q8TBJ5 459 aa10□□□□□ -0.81
CUX1-203ENST00000360264 SOCS4Q8WXH5 440 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms