RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 NAA15Q9BXJ9 866 aaKnown RBP20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PNPLA8Q9NP80 782 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 DPYSL4O14531 572 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 XPO1O14980 1071 aaKnown RBP20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 EPHB6O15197 1021 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 DDX6P26196 483 aaKnown RBP eCLIP20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SOX5P35711 763 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 AVPR1AP37288 418 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PPP3CCP48454 512 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PIGZQ86VD9 579 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ZNF606Q8WXB4 792 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SECISBP2LQ93073 1101 aaKnown RBP20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TTLL2Q9BWV7 592 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NACA2Q9H009 215 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TASP1Q9H6P5 420 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 IL21Q9HBE4 155 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ACP6Q9NPH0 428 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ST7Q9NRC1 585 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 EPS15L1Q9UBC2 864 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ZMYM5Q9UJ78 669 aa20.22■□□□□ 0.83
HLA-DRB1-201ENST00000360004 F11P03951 625 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CCDC172P0C7W6 258 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 RGS7P49802 495 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ARID5AQ03989 594 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 DPY19L2P1Q6NXN4 242 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SLC47A2Q86VL8 602 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GPIHBP1Q8IV16 184 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 FMNL3Q8IVF7 1028 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ZSCAN18Q8TBC5 510 aaPredicted RBP20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NOX5Q96PH1 765 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NUP58Q9BVL2 599 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 UBXN6Q9BZV1 441 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 XPO4Q9C0E2 1151 aaKnown RBP20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PTPRDP23468 1912 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 MYH10P35580 1976 aa20.21■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 C19orf67A6NJJ6 358 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TNFRSF10BO14763 440 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 MOSPD3O75425 235 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 CKMP06732 381 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 LCP1P13796 627 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 CLCN1P35523 988 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TKTL1P51854 596 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 STXBP5Q5T5C0 1151 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TAF3Q5VWG9 929 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TXNDC8Q6A555 127 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 DENND1BQ6P3S1 775 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 GPRIN1Q7Z2K8 1008 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 PASD1Q8IV76 773 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TTC16Q8NEE8 873 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ST13P5Q8NFI4 369 aaPredicted RBP20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 OVCA2Q8WZ82 227 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TLR8Q9NR97 1041 aaKnown RBP20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 GMIPQ9P107 970 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 DENND4AQ7Z401 1863 aa20.2■□□□□ 0.82
HLA-DRB1-201ENST00000360004 XIRP2A4UGR9 3374 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 CYP11B1P15538 503 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 PLA2G4AP47712 749 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 KIF11P52732 1056 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ADIGQ0VDE8 80 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 RNF135Q8IUD6 432 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ZNF397Q8NF99 534 aaPredicted RBP20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 GOLGA1Q92805 767 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 SMARCD2Q92925 531 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ZSWIM1Q9BR11 485 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TRIM5Q9C035 493 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 SYNCQ9H7C4 482 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ZFP14Q9HCL3 533 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 SEPT11Q9NVA2 429 aaKnown RBP20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 IGSF9Q9P2J2 1179 aa20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 CHORDC1Q9UHD1 332 aaPredicted RBP20.19■□□□□ 0.82
HLA-DRB1-201ENST00000360004 HHLA1C9JL84 531 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TULP2O00295 520 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 PIK3R2O00459 728 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ASGR2P07307 311 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 TPM1P09493 284 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 USP17L7P0C7H9 530 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 FERP16591 822 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 JAM2P57087 298 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 MEA1Q16626 185 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 FAM78AQ5JUQ0 283 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 MON1AQ86VX9 555 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 YAF2Q8IY57 180 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ARHGAP18Q8N392 663 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 NXPE3Q969Y0 559 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 IQCDQ96DY2 449 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ZSWIM3Q96MP5 696 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 KXD1Q9BQD3 176 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 RBSNQ9H1K0 784 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 SCML2Q9UQR0 700 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 NUMBLQ9Y6R0 609 aa20.18■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ZNF840PA6NDX5 716 aa20.17■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ZBED1O96006 694 aa20.17■□□□□ 0.82
HLA-DRB1-201ENST00000360004 RALAP11233 206 aa20.17■□□□□ 0.82
HLA-DRB1-201ENST00000360004 HDCP19113 662 aa20.17■□□□□ 0.82
HLA-DRB1-201ENST00000360004 ACADSBP45954 432 aa20.17■□□□□ 0.82
HLA-DRB1-201ENST00000360004 SNX16P57768 344 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms