RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 GPD1P21695 349 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 ALDH7A1P49419 539 aaKnown RBP24.34■■□□□ 1.49
SDF4-202ENST00000360001 TUBB4BP68371 445 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 ADCY1Q08828 1119 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 UBXN6Q9BZV1 441 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.34■■□□□ 1.49
SDF4-202ENST00000360001 PTPRSQ13332 1948 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 LRCH4O75427 683 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 EFEMP2O95967 443 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 FGGP02679 453 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 PDGFRAP16234 1089 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 SSR1P43307 286 aaKnown RBP24.34■■□□□ 1.49
SDF4-202ENST00000360001 OTOP2Q7RTS6 562 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 CNPY3Q9BT09 278 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 LRRC4Q9HBW1 653 aa24.34■■□□□ 1.49
SDF4-202ENST00000360001 ACAP1Q15027 740 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 SLC39A12Q504Y0 691 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 RAB41Q5JT25 222 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 LRRC38Q5VT99 294 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 TAS1R1Q7RTX1 841 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 GPRIN1Q7Z2K8 1008 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 PRKAG2Q9UGJ0 569 aa24.33■■□□□ 1.49
SDF4-202ENST00000360001 DPYSL4O14531 572 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 NDUFV1P49821 464 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 CTXN3Q4LDR2 81 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 C4orf50Q6ZRC1 276 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 ARCQ7LC44 396 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 KATNAL2Q8IYT4 538 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 DCP1BQ8IZD4 617 aaKnown RBP24.33■■□□□ 1.48
SDF4-202ENST00000360001 MMGT1Q8N4V1 131 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 BADQ92934 168 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 EPC1Q9H2F5 836 aa24.33■■□□□ 1.48
SDF4-202ENST00000360001 DMAP1Q9NPF5 467 aaPredicted RBP24.33■■□□□ 1.48
SDF4-202ENST00000360001 TKTL1P51854 596 aa24.32■■□□□ 1.48
SDF4-202ENST00000360001 PPIGQ13427 754 aaKnown RBP eCLIP24.32■■□□□ 1.48
SDF4-202ENST00000360001 RTP2Q5QGT7 225 aa24.32■■□□□ 1.48
SDF4-202ENST00000360001 SEL1L2Q5TEA6 688 aa24.32■■□□□ 1.48
SDF4-202ENST00000360001 ZNF280DQ6N043 979 aa24.32■■□□□ 1.48
SDF4-202ENST00000360001 SPATA2LQ8IUW3 424 aaPredicted RBP24.32■■□□□ 1.48
SDF4-202ENST00000360001 CMTR2Q8IYT2 770 aaKnown RBP24.32■■□□□ 1.48
SDF4-202ENST00000360001 SIX6OS1Q8N1H7 587 aa24.32■■□□□ 1.48
SDF4-202ENST00000360001 OR6C75A6NL08 312 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 MRPS5P82675 430 aaKnown RBP24.31■■□□□ 1.48
SDF4-202ENST00000360001 LONRF2Q1L5Z9 754 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 CCDC14Q49A88 953 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 TXNRD3NBQ6F5E7 133 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 NDRG1Q92597 394 aaKnown RBP24.31■■□□□ 1.48
SDF4-202ENST00000360001 IGSF21Q96ID5 467 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 ASNSD1Q9NWL6 643 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 TBC1D4O60343 1298 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 GJC1P36383 396 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 SLC25A11Q02978 314 aaKnown RBP24.31■■□□□ 1.48
SDF4-202ENST00000360001 C15orf59Q2T9L4 293 aaPredicted RBP24.31■■□□□ 1.48
SDF4-202ENST00000360001 ATP13A4Q4VNC1 1196 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 EFHC1Q5JVL4 640 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 SH3PXD2AQ5TCZ1 1133 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 KCNT2Q6UVM3 1135 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 ZNF365Q70YC5 407 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 CFAP57Q96MR6 1250 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 TTPALQ9BTX7 342 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 VN1R3Q9BXE9 311 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 AP1M1Q9BXS5 423 aa24.31■■□□□ 1.48
SDF4-202ENST00000360001 PATJQ8NI35 1801 aa24.3■■□□□ 1.48
SDF4-202ENST00000360001 CYP2F1P24903 491 aa24.3■■□□□ 1.48
SDF4-202ENST00000360001 FPGSQ05932 587 aa24.3■■□□□ 1.48
SDF4-202ENST00000360001 BTG3Q14201 252 aaPredicted RBP24.3■■□□□ 1.48
SDF4-202ENST00000360001 RNF168Q8IYW5 571 aaPredicted RBP24.3■■□□□ 1.48
SDF4-202ENST00000360001 GPR161Q8N6U8 529 aaKnown RBP24.3■■□□□ 1.48
SDF4-202ENST00000360001 NAP1L3Q99457 506 aaPredicted RBP24.3■■□□□ 1.48
SDF4-202ENST00000360001 ULBP1Q9BZM6 244 aa24.3■■□□□ 1.48
SDF4-202ENST00000360001 MRPL42Q9Y6G3 142 aaKnown RBP24.3■■□□□ 1.48
SDF4-202ENST00000360001 KRIT1O00522 736 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 RNF8O76064 485 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 FBXO21O94952 628 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 IL1R2P27930 398 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 CLUL1Q15846 466 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 NFE2Q16621 373 aaPredicted RBP24.29■■□□□ 1.48
SDF4-202ENST00000360001 SPOUT1Q5T280 376 aaKnown RBP24.29■■□□□ 1.48
SDF4-202ENST00000360001 RSPO2Q6UXX9 243 aaPredicted RBP24.29■■□□□ 1.48
SDF4-202ENST00000360001 POLNQ7Z5Q5 900 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 C7orf61Q8IZ16 206 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 EXD1Q8NHP7 514 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 PLVAPQ9BX97 442 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 ANKZF1Q9H8Y5 726 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 PNPLA8Q9NP80 782 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 CNGB3Q9NQW8 809 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 HSF2BPO75031 334 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 FGBP02675 491 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 MIPP30301 263 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 SDC4P31431 198 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 PCK1P35558 622 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 EPHB4P54760 987 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 RAB6CQ53S08 254 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 ANKS3Q6ZW76 656 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 SLC13A5Q86YT5 568 aaPredicted RBP24.29■■□□□ 1.48
SDF4-202ENST00000360001 FUBP3Q96I24 572 aaKnown RBP eCLIP24.29■■□□□ 1.48
SDF4-202ENST00000360001 C11orf84Q9BUA3 381 aaPredicted RBP24.29■■□□□ 1.48
SDF4-202ENST00000360001 RAB6CQ9H0N0 254 aa24.29■■□□□ 1.48
SDF4-202ENST00000360001 ABI2Q9NYB9 513 aaPredicted RBP24.29■■□□□ 1.48
SDF4-202ENST00000360001 NR2E1Q9Y466 385 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms