RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KRT3P12035 628 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 NPR3P17342 541 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 CTNNA2P26232 953 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 CXCR5P32302 372 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 PLA2G4AP47712 749 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 SLC11A1P49279 550 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 SKIV2LQ15477 1246 aaKnown RBP14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 PPP1R15BQ5SWA1 713 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 FAM102AQ5T9C2 384 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 OR6B2Q6IFH4 312 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 PMF1Q6P1K2 205 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 FAM183BPQ6ZVS7 135 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 ZDHHC17Q8IUH5 632 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 MYCBPAPQ8TBZ2 947 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 PHOSPHO2Q8TCD6 241 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 MCRS1Q96EZ8 462 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 HSFY1Q96LI6 401 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 RTP3Q9BQQ7 232 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 DUSP16Q9BY84 665 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 B3GNT5Q9BYG0 378 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 TRIM7Q9C029 511 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 METTL5Q9NRN9 209 aaKnown RBP14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 KRT82Q9NSB4 513 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 MARCH5Q9NX47 278 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 SLC4A7Q9Y6M7 1214 aa14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 SF3B1O75533 1304 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDLIM5-203ENST00000359265 MYBPHLA2RUH7 354 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 EFCAB8A8MWE9 144 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CLDN5O00501 218 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CTIFO43310 598 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 TADA3O75528 432 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 GJB6O95452 261 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 GALTP07902 379 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CTNNA1P35221 906 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 SCNN1AP37088 669 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 ALDH7A1P49419 539 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 RPL7AP62424 266 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 BTG3Q14201 252 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 PIGHQ14442 188 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CFAP221Q4G0U5 840 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 SPOUT1Q5T280 376 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 FUT10Q6P4F1 479 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 TMEM110Q86TL2 294 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CREG2Q8IUH2 290 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 GOLGA1Q92805 767 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CD101Q93033 1021 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 MYLPFQ96A32 169 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 SMARCD1Q96GM5 515 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 PCED1BQ96HM7 432 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 CARD9Q9H257 536 aa14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 RC3H2Q9HBD1 1191 aaKnown RBP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDLIM5-203ENST00000359265 RFXAPO00287 272 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 TULP2O00295 520 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 AP1G2O75843 785 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 OAZ2O95190 189 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 GJB5O95377 273 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 LAG3P18627 525 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 RPL34P49207 117 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 BCAR1P56945 870 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 TUBB4BP68371 445 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 CLUL1Q15846 466 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 CCDC142Q17RM4 750 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 FAM171A1Q5VUB5 890 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 ZNF280DQ6N043 979 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 C4orf50Q6ZRC1 276 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 PAQR9Q6ZVX9 377 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 ZNF572Q7Z3I7 529 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 PIGZQ86VD9 579 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 DCP1BQ8IZD4 617 aaKnown RBP14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 NIPA2Q8N8Q9 360 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 OR10T2Q8NGX3 314 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 KCTD13Q8WZ19 329 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 PKMYT1Q99640 499 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 ZBED2Q9BTP6 218 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 PLVAPQ9BX97 442 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 LRRC4Q9HBW1 653 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 AAASQ9NRG9 546 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 HCSTQ9UBK5 93 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 INSL6Q9Y581 213 aa14.55□□□□□ -0.08
PDLIM5-203ENST00000359265 PIK3R2O00459 728 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 PSTPIP1O43586 416 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 CEP104O60308 925 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 ATP2A2P16615 1042 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 DESP17661 470 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 GPD1P21695 349 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 PSMA2P25787 234 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 RWDD2BP57060 319 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 SLC6A3Q01959 620 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 ITIH3Q06033 890 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 VARS2Q5ST30 1063 aaKnown RBP14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 TEX35Q5T0J7 233 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 SEL1L2Q5TEA6 688 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 OLFML1Q6UWY5 402 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 RHOT1Q8IXI2 618 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms