RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PSTPIP1O43586 416 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 RCN1Q15293 331 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 TTLL9Q3SXZ7 439 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 C2CD6Q53TS8 623 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 ATG4AQ8WYN0 398 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 RUSC1Q9BVN2 902 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 MRGBPQ9NV56 204 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 CNTNAP5Q8WYK1 1306 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 CCL15-CCL14A0A0B4J2E2 113 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 TTLL13PA6NNM8 815 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 AP1G2O75843 785 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 SOX6P35712 828 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 CCL15Q16663 113 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 TRIM71Q2Q1W2 868 aaKnown RBP19.01■□□□□ 0.63
SHANK1-202ENST00000359082 GPATCH2LQ9NWQ4 482 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 RASA1P20936 1047 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 PNPLA4P41247 253 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 CAMK2GQ13555 558 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-202ENST00000359082 MAGED4Q96JG8 741 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 VPS26AO75436 327 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 ALDH7A1P49419 539 aaKnown RBP19.01■□□□□ 0.63
SHANK1-202ENST00000359082 KCNT1Q5JUK3 1230 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 DENND1BQ6P3S1 775 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 GPR141Q7Z602 305 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-202ENST00000359082 HEY2Q9UBP5 337 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 HAO1Q9UJM8 370 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 CDC42BPBQ9Y5S2 1711 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 NR5A2O00482 541 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 GLRA3O75311 464 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 PLEKP08567 350 aaPredicted RBP19.01■□□□□ 0.63
SHANK1-202ENST00000359082 HSPA13P48723 471 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 LAMC2Q13753 1193 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 SERPINB12Q96P63 405 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 PIF1Q9H611 641 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 CHST12Q9NRB3 414 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 TSC22D2O75157 780 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 SLC25A27O95847 323 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 APOA4P06727 396 aa19.01■□□□□ 0.63
SHANK1-202ENST00000359082 USP49Q70CQ1 688 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 CENPTQ96BT3 561 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 DEPDC7Q96QD5 511 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 RPS6KL1Q9Y6S9 549 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 PPP1R14AQ96A00 147 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 POU1F1P28069 291 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 KBTBD12Q3ZCT8 623 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 ENTPD7Q9NQZ7 604 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 VPS9D1Q9Y2B5 631 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 ZBTB22O15209 634 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 PSMA3P25788 255 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
SHANK1-202ENST00000359082 NFYCQ13952 458 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 TRIM25Q14258 630 aaKnown RBP19■□□□□ 0.63
SHANK1-202ENST00000359082 GNASQ5JWF2 1037 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 ACOT1Q86TX2 421 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 MTMR12Q9C0I1 747 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 CD248Q9HCU0 757 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 ATP6V1B2P21281 511 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 BNIPLQ7Z465 357 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 CRAMP1Q96RY5 1269 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 RHBDL2Q9NX52 303 aa19■□□□□ 0.63
SHANK1-202ENST00000359082 ENTPD3O75355 529 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 ZNF682O95780 498 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 USP39Q53GS9 565 aaKnown RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 MRNIPQ6NTE8 343 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 SLC13A5Q86YT5 568 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 MYOZ2Q9NPC6 264 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 SOX13Q9UN79 622 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 PPP1R3GB7ZBB8 358 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 P4HA2O15460 535 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 TFRCP02786 760 aaKnown RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 FYNP06241 537 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 STX5Q13190 355 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 LRRC8DQ7L1W4 858 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 HDDC2Q7Z4H3 204 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 MYO1HQ8N1T3 1032 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 SNX13Q9Y5W8 968 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 SPACA6W5XKT8 324 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 RRN3P2A6NIE6 340 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 MIB1Q86YT6 1006 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 NOA1Q8NC60 698 aaKnown RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 CHST13Q8NET6 341 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 ASZ1Q8WWH4 475 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 ZSWIM1Q9BR11 485 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 FICDQ9BVA6 458 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 NMRK1Q9NWW6 199 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 AAR2Q9Y312 384 aaKnown RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 PARNO95453 639 aaKnown RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 COL23A1Q86Y22 540 aaPredicted RBP18.99■□□□□ 0.63
SHANK1-202ENST00000359082 MMGT1Q8N4V1 131 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 ANKS1AQ92625 1134 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 DYRK1BQ9Y463 629 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 HASPINQ8TF76 798 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 JCADQ9P266 1359 aa18.99■□□□□ 0.63
SHANK1-202ENST00000359082 RPA1P27694 616 aa18.98■□□□□ 0.63
SHANK1-202ENST00000359082 FBXO32Q969P5 355 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms