RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 WNK4Q96J92 1243 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 MMTAG2Q9BU76 263 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 GANQ9H2C0 597 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 V9GYQ6 96 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 CBX6O95503 412 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 STAG3L1P0CL83 205 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 CXCL8P10145 99 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 MAPTP10636 758 aaKnown RBP14.21□□□□□ -0.13
VCP-201ENST00000358901 KPNB1Q14974 876 aaKnown RBP14.21□□□□□ -0.13
VCP-201ENST00000358901 FAM83EQ2M2I3 478 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 APOBEC3HQ6NTF7 200 aaKnown RBP14.21□□□□□ -0.13
VCP-201ENST00000358901 INPP4AQ96PE3 977 aaPredicted RBP14.21□□□□□ -0.13
VCP-201ENST00000358901 UBQLN1Q9UMX0 589 aaKnown RBP14.21□□□□□ -0.13
VCP-201ENST00000358901 TM9SF1O15321 606 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 SUPT7LO94864 414 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 VIL1P09327 827 aaKnown RBP14.21□□□□□ -0.13
VCP-201ENST00000358901 RALBP11234 206 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 NFIL3Q16649 462 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 WDR49Q8IV35 697 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 CHST12Q9NRB3 414 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 DCDC2Q9UHG0 476 aa14.21□□□□□ -0.13
VCP-201ENST00000358901 E9PBE3 544 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 TNPO2O14787 897 aaKnown RBP14.21□□□□□ -0.14
VCP-201ENST00000358901 KLHL41O60662 606 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 PGK2P07205 417 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 ZSCAN5DPP0CG00 497 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 STX5Q13190 355 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 ITGB3BPQ13352 177 aaPredicted RBP14.21□□□□□ -0.14
VCP-201ENST00000358901 LAMC2Q13753 1193 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 CCNJLQ8IV13 435 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 TMEM176AQ96HP8 235 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 ZBTB45Q96K62 511 aaPredicted RBP14.21□□□□□ -0.14
VCP-201ENST00000358901 PDP2Q9P2J9 529 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 PCDHGB4Q9UN71 923 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 AP4E1Q9UPM8 1137 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 SLC30A1Q9Y6M5 507 aa14.21□□□□□ -0.14
VCP-201ENST00000358901 RPS6KA5O75582 802 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 FSBPO95073 299 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 SLURP2P0DP57 97 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 PTPN7P35236 360 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 RHBDL3P58872 404 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 CNDP1Q96KN2 507 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 EIF2AQ9BY44 585 aaKnown RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 WDCPQ9H6R7 721 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 KCNMB3Q9NPA1 279 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 MRGBPQ9NV56 204 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 CALCAP01258 141 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 ETFBP38117 255 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 MARCKSL1P49006 195 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 PGM5Q15124 567 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 ZNF662Q6ZS27 426 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 CATSPERBQ9H7T0 1116 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 LRRC40Q9H9A6 602 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 ANKRD63C9JTQ0 380 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 THRAP10827 490 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 TFE3P19532 575 aaPredicted RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 ADRA1DP25100 572 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 AVPR1AP37288 418 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 ALDH5A1P51649 535 aaPredicted RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 ARHGEF6Q15052 776 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 VCPIP1Q96JH7 1222 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 AVENQ9NQS1 362 aaPredicted RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 SUPT3HB4E1H0 165 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 FCHO1O14526 889 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 KRT16P08779 473 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 CPA3P15088 417 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 CDH8P55286 799 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 PLOD1Q02809 727 aaPredicted RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 KRT33BQ14525 404 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 OLFML2BQ68BL8 750 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 MSL3Q8N5Y2 521 aaKnown RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 PRELID2Q8N945 189 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 ETNPPLQ8TBG4 499 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 INPP5DQ92835 1189 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 CNBD2Q96M20 576 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
VCP-201ENST00000358901 EFCAB1Q9HAE3 211 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 SPATA31D1Q6ZQQ2 1576 aa14.2□□□□□ -0.14
VCP-201ENST00000358901 ADGRA2Q96PE1 1338 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 KBTBD13C9JR72 458 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 F8VP50 259 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 TIMM44O43615 452 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 APOA4P06727 396 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 STRA8Q7Z7C7 330 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 CD302Q8IX05 232 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 MREGQ8N565 214 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 SLC38A7Q9NVC3 462 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 ARMCX1Q9P291 453 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 TAGLN3Q9UI15 199 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 SNX3O60493 162 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 AP1G2O75843 785 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 JCHAINP01591 159 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 VTNP04004 478 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 IFNA8P32881 189 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 RAD51Q06609 339 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 PTK6Q13882 451 aa14.19□□□□□ -0.14
VCP-201ENST00000358901 RRP1BQ14684 758 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms