RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 TM4SF5O14894 197 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 DCLK1O15075 740 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 KLRC4O43908 158 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 EXOC3O60645 756 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 CYP17A1P05093 508 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 ZSCAN22P10073 491 aaPredicted RBP10.88□□□□□ -0.67
LINC01560-201ENST00000357412 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
LINC01560-201ENST00000357412 AFMP43652 599 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 ME1P48163 572 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 LIMK1P53667 647 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 CDH8P55286 799 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 CLDN10P78369 228 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 MESP2Q0VG99 397 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 STK4Q13043 487 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 PSMD2Q13200 908 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 PKP1Q13835 747 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 DHCR24Q15392 516 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 TDRD10Q5VZ19 366 aaKnown RBP10.88□□□□□ -0.67
LINC01560-201ENST00000357412 PAQR9Q6ZVX9 377 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 FILIP1Q7Z7B0 1213 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 GRAMD1CQ8IYS0 662 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 B3GALNT2Q8NCR0 500 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 KIAA0895Q8NCT3 520 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 TMEM174Q8WUU8 243 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 SYAP1Q96A49 352 aaPredicted RBP10.88□□□□□ -0.67
LINC01560-201ENST00000357412 DUSP15Q9H1R2 295 aaPredicted RBP10.88□□□□□ -0.67
LINC01560-201ENST00000357412 SMOC1Q9H4F8 434 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 SMYD3Q9H7B4 428 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 DMAC2Q9NW81 257 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 SMPD4Q9NXE4 827 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 FAM13BQ9NYF5 915 aa10.88□□□□□ -0.67
LINC01560-201ENST00000357412 TNFRSF10BO14763 440 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SCAMP3O14828 347 aaKnown RBP10.87□□□□□ -0.67
LINC01560-201ENST00000357412 VNN1O95497 513 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 ABL1P00519 1130 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 C4BPAP04003 597 aaKnown RBP10.87□□□□□ -0.67
LINC01560-201ENST00000357412 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
LINC01560-201ENST00000357412 YWHAQP27348 245 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 MPLP40238 635 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SLC6A11P48066 632 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 AASDHQ4L235 1098 aaPredicted RBP10.87□□□□□ -0.67
LINC01560-201ENST00000357412 RHBDF2Q6PJF5 856 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 RASSF3Q86WH2 238 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SFTPA1Q8IWL2 248 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 NUP93Q8N1F7 819 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 C12orf50Q8NA57 414 aaPredicted RBP10.87□□□□□ -0.67
LINC01560-201ENST00000357412 TSTD1Q8NFU3 115 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SCAMP5Q8TAC9 235 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 GOLGA5Q8TBA6 731 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 PARD3BQ8TEW8 1205 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 ELMO3Q96BJ8 720 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 PAGE5Q96GU1 130 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 ZFRQ96KR1 1074 aaKnown RBP10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SLITRK1Q96PX8 696 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 KCNK16Q96T55 309 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 IL37Q9NZH6 218 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 CFAP97Q9P2B7 532 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 SERTAD1Q9UHV2 236 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 RCOR1Q9UKL0 485 aa10.87□□□□□ -0.67
LINC01560-201ENST00000357412 TRIP11Q15643 1979 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 A0A0A0MRY4 1105 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 FAM92AA1XBS5 289 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 SLC9A3R1O14745 358 aaPredicted RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 COCHO43405 550 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 ACTN4O43707 911 aaKnown RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 PHACTR2O75167 634 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 SLFN14P0C7P3 912 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 ZDHHC11BP0C7U3 371 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 HNRNPLP14866 589 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 AP3M2P53677 418 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 SLC5A3P53794 718 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 SEC13P55735 322 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 DLG4P78352 724 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 DNM1Q05193 864 aaKnown RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 IFRD2Q12894 506 aaPredicted RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 BIRC3Q13489 604 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 NCOA4Q13772 614 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 CRY1Q16526 586 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 ZNF699Q32M78 642 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 C2orf27AQ580R0 203 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 SNX30Q5VWJ9 437 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 ATL3Q6DD88 541 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 TCEAL6Q6IPX3 200 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 FAM35AQ86V20 835 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 C12orf40Q86WS4 652 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 SLC9A9Q8IVB4 645 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 OVCA2Q8WZ82 227 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 DDX1Q92499 740 aaKnown RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 TCEAL3Q969E4 200 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 FBXO32Q969P5 355 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 CNOT6LQ96LI5 555 aaKnown RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 KCTD10Q9H3F6 313 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 VPS45Q9NRW7 570 aa10.86□□□□□ -0.67
LINC01560-201ENST00000357412 CHORDC1Q9UHD1 332 aaPredicted RBP10.86□□□□□ -0.67
LINC01560-201ENST00000357412 CITO14578 2027 aa10.85□□□□□ -0.67
LINC01560-201ENST00000357412 RHOBTB1O94844 696 aa10.85□□□□□ -0.67
LINC01560-201ENST00000357412 RTN3O95197 1032 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms